RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.33■□□□□ 0.37
UBQLN1-201ENST00000257468 DPP3Q9NY33 737 aa17.33■□□□□ 0.37
UBQLN1-201ENST00000257468 TSPAN16Q9UKR8 245 aa17.33■□□□□ 0.37
UBQLN1-201ENST00000257468 GINS2Q9Y248 185 aa17.33■□□□□ 0.37
UBQLN1-201ENST00000257468 A0A1W2PPM1 405 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 PPEF2O14830 753 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 RNF8O76064 485 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 PFKMP08237 780 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 VDRP11473 427 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 KRT15P19012 456 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 ATICP31939 592 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 EIF3EP60228 445 aaKnown RBP17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 ZNF792Q3KQV3 632 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 CEP128Q6ZU80 1094 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 FAM47EQ6ZV65 393 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 CYP4V2Q6ZWL3 525 aaPredicted RBP17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 ZC3H18Q86VM9 953 aaKnown RBP17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 NAT8LQ8N9F0 302 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 CMASQ8NFW8 434 aaPredicted RBP17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 TRABDQ9H4I3 376 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 SLC12A4Q9UP95 1085 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 EFR3BQ9Y2G0 817 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 ACTL7BQ9Y614 415 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 TRIP11Q15643 1979 aa17.33■□□□□ 0.36
UBQLN1-201ENST00000257468 UBOX5O94941 541 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 HMGCRP04035 888 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 SPATA21Q7Z572 469 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 PPIL6Q8IXY8 311 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 FUKQ8N0W3 1084 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 RIBC1Q8N443 379 aaPredicted RBP17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 RXFP2Q8WXD0 754 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 MAGEB18Q96M61 343 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 VRTNQ9H8Y1 702 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 CYP3A43Q9HB55 503 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 BARX2Q9UMQ3 279 aaPredicted RBP17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 CITO14578 2027 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 PLXNB2O15031 1838 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 MAGEB2O15479 319 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 RBP3P10745 1247 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 TAC1P20366 129 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 CDH6P55285 790 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 ATP11AP98196 1134 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 MARCH8Q5T0T0 291 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 C9orf131Q5VYM1 1079 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 SPATA18Q8TC71 538 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 LRRN4Q8WUT4 740 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 ACAP3Q96P50 834 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 LPIN3Q9BQK8 851 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 UBN1Q9NPG3 1134 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 GPATCH2LQ9NWQ4 482 aa17.32■□□□□ 0.36
UBQLN1-201ENST00000257468 H3BRB1 525 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 APOC4-APOC2K7ER74 178 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 APOC2P02655 101 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 P4HA1P13674 534 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 PDGFRAP16234 1089 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 GPD1P21695 349 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 RPA3P35244 121 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 ZNF143P52747 638 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 BASP1P80723 227 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 INCA1Q0VD86 236 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 KIZQ2M2Z5 673 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 GOLGA7BQ2TAP0 167 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 CYB5D1Q6P9G0 228 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 TTC13Q8NBP0 860 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 GPRC5AQ8NFJ5 357 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 RMDN2Q96LZ7 410 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 FAM49BQ9NUQ9 324 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 RABGEF1Q9UJ41 708 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 NME7Q9Y5B8 376 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 SCN1AP35498 2009 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 C2CD4BA6NLJ0 364 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 DNAJC8O75937 253 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 MAP3K6O95382 1288 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 RBP5P82980 135 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 XRCC4Q13426 336 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 SNAPC2Q13487 334 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 PPP1R26Q5T8A7 1209 aaPredicted RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 TDRPQ86YL5 185 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 SUGP1Q8IWZ8 645 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 FBXO36Q8NEA4 188 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 KATNBL1Q9H079 304 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 ASNSD1Q9NWL6 643 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 XPO7Q9UIA9 1087 aaKnown RBP17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 ITGA11Q9UKX5 1188 aa17.31■□□□□ 0.36
UBQLN1-201ENST00000257468 HES2Q9Y543 173 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms