RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 GINS2Q9Y248 185 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 DCDC2CA8MYV0 355 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 LRPAP1P30533 357 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 ALDH1A3P47895 512 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 RABL6Q3YEC7 729 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 EXOC3L1Q86VI1 746 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 ARHGEF26Q96DR7 871 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 CEP170P1Q96L14 293 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 TRIM39Q9HCM9 518 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 ZBTB1Q9Y2K1 713 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 V9GYQ6 96 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 PEX1O43933 1283 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 RPA3P35244 121 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 OLR1P78380 273 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 TP53BP2Q13625 1128 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 RRP1BQ14684 758 aaKnown RBP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 PUS10Q3MIT2 529 aaKnown RBP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 ARHGEF16Q5VV41 709 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 TRIM72Q6ZMU5 477 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 NT5DC3Q86UY8 548 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 DDIASQ8IXT1 998 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 OSCP1Q8WVF1 389 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 ASZ1Q8WWH4 475 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 MKL1Q969V6 931 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 SCN3BQ9NY72 215 aa10.62□□□□□ -0.71
TRPM1-201ENST00000256552 KLHL8Q9P2G9 620 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-201ENST00000256552 SESN2P58004 480 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 HEATR6Q6AI08 1181 aaKnown RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CCDC60Q8IWA6 550 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 TSPAN14Q8NG11 270 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 MED10Q9BTT4 135 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SFMBT1Q9UHJ3 866 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SLC16A4O15374 487 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 ADRA1DP25100 572 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 LSAMPQ13449 338 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CAPRIN1Q14444 709 aaKnown RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 DMC1Q14565 340 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 ARMCX4Q5H9R4 360 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 PADI6Q6TGC4 694 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 LRRC49Q8IUZ0 686 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SKA2Q8WVK7 121 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 RASSF5Q8WWW0 418 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 ITPKCQ96DU7 683 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 HEXIM2Q96MH2 286 aaKnown RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 DUSP9Q99956 384 aaKnown RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 COPS7BQ9H9Q2 264 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CDC42BPBQ9Y5S2 1711 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 EVPLLA8MZ36 301 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 E9PBE3 544 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 PSMA3P25788 255 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CDH6P55285 790 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SNAP25P60880 206 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CENPPQ6IPU0 288 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 RNF135Q8IUD6 432 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 FITM2Q8N6M3 262 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 EFCAB1Q9HAE3 211 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 HMG20AQ9NP66 347 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 KLHL20Q9Y2M5 609 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 E9PCH4 1651 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 NRKQ7Z2Y5 1582 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 IQGAP3Q86VI3 1631 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 ALAS1P13196 640 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 TFE3P19532 575 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 FOLH1Q04609 750 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 BFSP2Q13515 415 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 KRT73Q86Y46 540 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CDKL3Q8IVW4 592 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 DENND6AQ8IWF6 608 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 PCYOX1LQ8NBM8 494 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 FAM213AQ9BRX8 229 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 EML4Q9HC35 981 aaKnown RBP10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CNTNAP5Q8WYK1 1306 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
TRPM1-201ENST00000256552 FAM95CA0A1B0GW59 222 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 CCDC142Q17RM4 750 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 SYDE2Q5VT97 1194 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 ENOSF1Q7L5Y1 443 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 AKAP14Q86UN6 197 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 EPB41L4AQ9HCS5 686 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-201ENST00000256552 PNPLA7Q6ZV29 1317 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 A0A087WXM4 84 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 FAM237AA0A1B0GTK4 181 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 SEMA3DO95025 777 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 PAEPP09466 180 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 CPA3P15088 417 aa10.6□□□□□ -0.71
TRPM1-201ENST00000256552 PRKACBP22694 351 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms