RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PLXNB2O15031 1838 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 COL1A2P08123 1366 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PTPN1P18031 435 aaKnown RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 CYP3A5P20815 502 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 WEE1P30291 646 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ADCY8P40145 1251 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 WHAMMP3Q1A5X7 153 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 MEI1Q5TIA1 1274 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 TAX1BP1Q86VP1 789 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PYROXD2Q8N2H3 581 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PCED1BQ96HM7 432 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 FAN1Q9Y2M0 1017 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ATP8A1Q9Y2Q0 1164 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 GVINP1Q7Z2Y8 2422 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 H7C0C1 242 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 KPNA6O60684 536 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 TBX18O95935 607 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ALDH2P05091 517 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SELPP16109 830 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SDC4P31431 198 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ATP5OP48047 213 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 CDK17Q00537 523 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 MTMR3Q13615 1198 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 NFIL3Q16649 462 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SV2CQ496J9 727 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 NOMO2Q5JPE7 1267 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 URGCPQ8TCY9 931 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 TRPC7Q9HCX4 862 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PRM3Q9NNZ6 103 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ALG13Q9NP73 1137 aaKnown RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 NME7Q9Y5B8 376 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 WDR90Q96KV7 1748 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 PER2O15055 1255 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 MSI1O43347 362 aaKnown RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SPATA2LQ8IUW3 424 aaPredicted RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 RNF10Q8N5U6 811 aaKnown RBP12.24□□□□□ -0.45
LIN28A-201ENST00000254231 FAM172AQ8WUF8 416 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 DEPDC1BQ8WUY9 529 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 ULBP1Q9BZM6 244 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
LIN28A-201ENST00000254231 LCTP09848 1927 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 M0QYT0 321 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 MYOGP15173 224 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 ADAM17P78536 824 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 BFSP2Q13515 415 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 USP33Q8TEY7 942 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 SEPT8Q92599 483 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 GPR62Q9BZJ7 368 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 IGFLR1Q9H665 355 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 R3HDM2Q9Y2K5 976 aaKnown RBP12.23□□□□□ -0.45
LIN28A-201ENST00000254231 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 A0A0U1RQF3 1178 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 AP3M2P53677 418 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 DEFB103AP81534 67 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 DUSP4Q13115 394 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 GSTCDQ8NEC7 633 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 TMEM121Q9BTD3 319 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 NAALADL1Q9UQQ1 740 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 CST8O60676 142 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 CETN2P41208 172 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
LIN28A-201ENST00000254231 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 DEFB106AQ8N104 65 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
LIN28A-201ENST00000254231 NEBLO76041 1014 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 FAM153BP0C7A2 387 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 VDRP11473 427 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 HPDP32754 393 aaPredicted RBP12.22□□□□□ -0.45
LIN28A-201ENST00000254231 KCNJ6P48051 423 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 FAM153CQ494X1 144 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
LIN28A-201ENST00000254231 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 TMLHEQ9NVH6 421 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIN28A-201ENST00000254231 FAM153AQ9UHL3 310 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
LIN28A-201ENST00000254231 ITGB8P26012 769 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 SULT1E1P49888 294 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 TSPY1Q01534 308 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 CLLU1OSQ5K130 101 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms