RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 F2P00734 622 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 CPLX4Q7Z7G2 160 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 TMEM40Q8WWA1 233 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 C2CD4BA6NLJ0 364 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 HCRTO43612 131 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 GPD1P21695 349 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 ZNF200P98182 395 aaPredicted RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 MMRN1Q13201 1228 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 RNASEH2BQ5TBB1 312 aaKnown RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 NOTUMQ6P988 496 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 TTC30AQ86WT1 665 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 RFX6Q8HWS3 928 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 CHMP6Q96FZ7 201 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 ZNF317Q96PQ6 595 aaPredicted RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 PCDH9Q9HC56 1237 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 GOLGA8MH3BSY2 632 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 DARSP14868 501 aaKnown RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 DRD4P21917 467 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 YARSP54577 528 aaKnown RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 ACAP1Q15027 740 aa22.73■■□□□ 1.23
CLN6-201ENST00000249806 TAB3Q8N5C8 712 aaPredicted RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 TRIM6Q9C030 488 aaPredicted RBP22.73■■□□□ 1.23
CLN6-201ENST00000249806 TCEA3O75764 348 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 RECQL4O94761 1208 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 IFNAR2P48551 515 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 IFT88Q13099 833 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 MORF4L2Q15014 288 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 CYP4V2Q6ZWL3 525 aaPredicted RBP22.72■■□□□ 1.23
CLN6-201ENST00000249806 TLK2Q86UE8 772 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 SCUBE3Q8IX30 993 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 CFAP57Q96MR6 1250 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 CNPY3Q9BT09 278 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 FOXP3Q9BZS1 431 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 KLK14Q9P0G3 267 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 NAALADL1Q9UQQ1 740 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 SMIM35A0A1B0GVV1 85 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 MBLAC1A4D2B0 266 aaPredicted RBP22.72■■□□□ 1.23
CLN6-201ENST00000249806 C5orf60A6NFR6 353 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 PCK1P35558 622 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 ATP11AP98196 1134 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 GAD2Q05329 585 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 MFSD10Q14728 455 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 LRRC14Q15048 493 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 CCL14Q16627 93 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 MORN1Q5T089 497 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 ALKAL1Q6UXT8 129 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 SPATS2Q86XZ4 545 aaKnown RBP22.72■■□□□ 1.23
CLN6-201ENST00000249806 UNC45BQ8IWX7 931 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 TTC13Q8NBP0 860 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 SEC16BQ96JE7 1060 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 SLC5A4Q9NY91 659 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 DERAQ9Y315 318 aa22.72■■□□□ 1.23
CLN6-201ENST00000249806 TREHO43280 583 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 PKDCCQ504Y2 493 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 FAM182AQ5T1J6 154 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 VSTM1Q6UX27 236 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 CAPN12Q6ZSI9 719 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 OR6B3Q8NGW1 331 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 MGARPQ8TDB4 240 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 DPEP3Q9H4B8 488 aa22.71■■□□□ 1.23
CLN6-201ENST00000249806 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.71■■□□□ 1.236e-7■■□□□ 13.2
CLN6-201ENST00000249806 TMEM120BA0PK00 339 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 BANF1O75531 89 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 GABBR2O75899 941 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 ZNF865P0CJ78 1059 aaPredicted RBP22.7■■□□□ 1.23
CLN6-201ENST00000249806 MAGEA9P43362 315 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 NRLP54845 237 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 CDH6P55285 790 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 MAP2K5Q13163 448 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 SOWAHAQ2M3V2 549 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 CCDC14Q49A88 953 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 C9orf57Q5W0N0 161 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 C6orf89Q6UWU4 347 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 NPNTQ6UXI9 565 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 BEST2Q8NFU1 509 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 PRCCQ92733 491 aaPredicted RBP22.7■■□□□ 1.23
CLN6-201ENST00000249806 B3GNT5Q9BYG0 378 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 RNF39Q9H2S5 420 aa22.7■■□□□ 1.23
CLN6-201ENST00000249806 FAM124BQ9H5Z6 455 aaPredicted RBP22.7■■□□□ 1.23
CLN6-201ENST00000249806 PIN4Q9Y237 131 aaKnown RBP22.7■■□□□ 1.23
CLN6-201ENST00000249806 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
CLN6-201ENST00000249806 LIG3P49916 1009 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 CDC42EP1Q00587 391 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 BEX3Q00994 111 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 ADCY1Q08828 1119 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 SF3A3Q12874 501 aaKnown RBP eCLIP22.7■■□□□ 1.22
CLN6-201ENST00000249806 STAT4Q14765 748 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 ANKRD22Q5VYY1 191 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 OLFML1Q6UWY5 402 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 MICALCLQ6ZW33 695 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 APBB1IPQ7Z5R6 666 aaPredicted RBP22.7■■□□□ 1.22
CLN6-201ENST00000249806 ZBED8Q8IZ13 594 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 C7orf31Q8N865 590 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 RSAD2Q8WXG1 361 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 RASSF4Q9H2L5 321 aa22.7■■□□□ 1.22
CLN6-201ENST00000249806 APOC4-APOC2K7ER74 178 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 APOC2P02655 101 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 RPL22P35268 128 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms