RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 NDRG2Q9UN36 371 aaKnown RBP13.6□□□□□ -0.23
PDZD11-201ENST00000239666 MAGED2Q9UNF1 606 aaPredicted RBP13.6□□□□□ -0.23
PDZD11-201ENST00000239666 FANCMQ8IYD8 2048 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 DENND4CQ5VZ89 1909 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 TRAV19A0A0A6YYK7 116 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 A0A1W2PQ27 194 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 A0A1W2PQ64 194 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 A0A1W2PQD8 194 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 ARNTLO00327 626 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CLIC2O15247 247 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 MAPK13O15264 365 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
PDZD11-201ENST00000239666 HMGA1P17096 107 aaKnown RBP13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CD72P21854 359 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CCNE1P24864 410 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CYP2F1P24903 491 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 GGCXP38435 758 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 GRIK1P39086 918 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CXCL12P48061 93 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 FAM160A1Q05DH4 1040 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CUL4BQ13620 913 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 CCDC150Q8NCX0 1101 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 OR6B3Q8NGW1 331 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 SLC46A2Q9BY10 475 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 ELOVL4Q9GZR5 314 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 BLZF1Q9H2G9 400 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 PRDM9Q9NQV7 894 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
PDZD11-201ENST00000239666 F5P12259 2224 aa13.59□□□□□ -0.23
PDZD11-201ENST00000239666 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 SPECC1L-ADORA2AF8WAN1 911 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 SOAT2O75908 522 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PAPSS2O95340 614 aaPredicted RBP13.58□□□□□ -0.24
PDZD11-201ENST00000239666 S1PR4O95977 384 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 TCF3P15923 654 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 HOXD13P35453 343 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 CLDN10P78369 228 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 CYP27A1Q02318 531 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 GRSF1Q12849 480 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDZD11-201ENST00000239666 BIRC3Q13489 604 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 RUNX3Q13761 415 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 KCNB1Q14721 858 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 FBXO43Q4G163 708 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 TTC9BQ8N6N2 239 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 ZSWIM2Q8NEG5 633 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PDZD8Q8NEN9 1154 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 OR5B17Q8NGF7 314 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PARD3BQ8TEW8 1205 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 C8orf48Q96LL4 319 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 HINFPQ9BQA5 517 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
PDZD11-201ENST00000239666 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
PDZD11-201ENST00000239666 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.24
PDZD11-201ENST00000239666 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
PDZD11-201ENST00000239666 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 FAM237AA0A1B0GTK4 181 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 A8MXQ7 604 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 SLC9A3R1O14745 358 aaPredicted RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CLSTN1O94985 981 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CST3P01034 146 aaPredicted RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CKMP06732 381 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CHRNB1P11230 501 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 PFKFB1P16118 471 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 DRD1P21728 446 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 ACAT1P24752 427 aaKnown RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CTHP32929 405 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 MMP16P51512 607 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 WNT7BP56706 349 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 NOP14P78316 857 aaKnown RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 NUCB2P80303 420 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CYP4F8P98187 520 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 MTAPQ13126 283 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 NFIL3Q16649 462 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 DDR2Q16832 855 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 INTS8Q75QN2 995 aaKnown RBP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDZD11-201ENST00000239666 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
PDZD11-201ENST00000239666 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms