RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 GABBR2O75899 941 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PLEKP08567 350 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ATF6P18850 670 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 EPHB3P54753 998 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 SLC8A3P57103 927 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 FMO1Q01740 532 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 COL19A1Q14993 1142 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 TMC5Q6UXY8 1006 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF571Q7Z3V5 609 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 DNAJB7Q7Z6W7 309 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PASD1Q8IV76 773 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ANP32BQ92688 251 aaKnown RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 SPATA17Q96L03 361 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF512Q96ME7 567 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PCDHB18PQ96TA0 734 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 CHP1Q99653 195 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 SYT11Q9BT88 431 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 DMAP1Q9NPF5 467 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ABHD10Q9NUJ1 306 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 CLDND1Q9NY35 253 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 CLEC1BQ9P126 229 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ARHGAP20Q9P2F6 1191 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 YIPF1Q9Y548 306 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF638Q14966 1978 aaKnown RBP10.75□□□□□ -0.69
HMGCL-201ENST00000235958 GREB1Q4ZG55 1949 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SLC38A8A6NNN8 435 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 M0QYV0 167 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 TNFRSF10BO14763 440 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 TRIM66O15016 1216 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 CCL16O15467 120 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 LRG1P02750 347 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 HNRNPA1P09651 372 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 PTPN2P17706 415 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 ANXA13P27216 316 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 EIF4A3P38919 411 aaKnown RBP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 BCAT1P54687 386 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 MEA1Q16626 185 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 CCDC186Q7Z3E2 898 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 PIGZQ86VD9 579 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 NUP93Q8N1F7 819 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 TMEM35BQ8NCS4 154 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SCAMP5Q8TAC9 235 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 FEZF2Q8TBJ5 459 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 STK32AQ8WU08 396 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 CPA5Q8WXQ8 436 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
HMGCL-201ENST00000235958 CEP295NLQ96MC4 621 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 PANX2Q96RD6 677 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 APOL5Q9BWW9 433 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 DZANK1Q9NVP4 752 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 ZDHHC7Q9NXF8 308 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 IL37Q9NZH6 218 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 ASB3Q9Y575 518 aa10.74□□□□□ -0.69
HMGCL-201ENST00000235958 DDX3XO00571 662 aaKnown RBP eCLIP10.73□□□□□ -0.694e-10■■■■□ 21.5
HMGCL-201ENST00000235958 PAPLNO95428 1278 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CSH1P0DML2 217 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CSH2P0DML3 217 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 SRGAP2BP0DMP2 458 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 HMGA1P17096 107 aaKnown RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 HOXA9P31269 272 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CDH5P33151 784 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 RGS7P49802 495 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 KIF11P52732 1056 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 USP46P62068 366 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CDK17Q00537 523 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 PLD1Q13393 1074 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 VEPH1Q14D04 833 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 TAF12Q16514 161 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 NAA35Q5VZE5 725 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 DENND5BQ6ZUT9 1274 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 HS6ST3Q8IZP7 471 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 ELMOD1Q8N336 334 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 SLC30A5Q8TAD4 765 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 KCTD13Q8WZ19 329 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 PSMG2Q969U7 264 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF707Q96C28 371 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 MSLNLQ96KJ4 702 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 HSFY1Q96LI6 401 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms