RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 JAK1P23458 1154 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 HSPA13P48723 471 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 NDST2P52849 883 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 AP3M2P53677 418 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 ARHGAP8P85298 464 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 RALGPS1Q5JS13 557 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CLVS1Q8IUQ0 354 aaPredicted RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 TRUB1Q8WWH5 349 aaKnown RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 PPCSQ9HAB8 311 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 PSMC3IPQ9P2W1 217 aaPredicted RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 DLEC1Q9Y238 1755 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 SPOPO43791 374 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 PRKACBP22694 351 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 RPA1P27694 616 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 PEX3P56589 373 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CCNG2Q16589 344 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 ATP2A3Q93084 1043 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 TMX2-CTNND1H3BSU7 103 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 RGS13O14921 159 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 MTRF1O75570 445 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 ATE1O95260 518 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 MAN1A1P33908 653 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 SOX5P35711 763 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 EPHB1P54762 984 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CTAG1AP78358 180 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 OXA1LQ15070 435 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 TRIM16LQ309B1 348 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 FAM26FQ5R3K3 315 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 RARS2Q5T160 578 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 FRMD5Q7Z6J6 570 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 ZCCHC9Q8N567 271 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 RAD54LQ92698 747 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 PCDHGA11Q9Y5H2 935 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 J3QRK9 145 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 KPNA4O00629 521 aaPredicted RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 H6PDO95479 791 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 AOC1P19801 751 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 LSM12Q3MHD2 195 aaKnown RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
MSH2-201ENST00000233146 ADCY4Q8NFM4 1077 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 GRK7Q8WTQ7 553 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 GPKOWQ92917 476 aaPredicted RBP eCLIP13.56□□□□□ -0.24
MSH2-201ENST00000233146 FBXL8Q96CD0 374 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 KLHL25Q9H0H3 589 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 MKS1Q9NXB0 559 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 SATB2Q9UPW6 733 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 RNF11Q9Y3C5 154 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CORINQ9Y5Q5 1042 aa13.56□□□□□ -0.24
MSH2-201ENST00000233146 CFAP99D6REC4 459 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CLDN3O15551 220 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 BMP10O95393 424 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 GABRB3P28472 473 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 ADAM17P78536 824 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CCDC142Q17RM4 750 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 BTBD8Q5XKL5 378 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CCDC81Q6ZN84 652 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 ANKRD13BQ86YJ7 626 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CHERPQ8IWX8 916 aaKnown RBP13.55□□□□□ -0.24
MSH2-201ENST00000233146 LCORLQ8N3X6 602 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 DAGLBQ8NCG7 672 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 XAB2Q9HCS7 855 aaKnown RBP13.55□□□□□ -0.24
MSH2-201ENST00000233146 BGNP21810 368 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 BTDP43251 543 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 SELENBP1Q13228 472 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CLEC16AQ2KHT3 1053 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 ZNF34Q8IZ26 560 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 CCDC89Q8N998 374 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 HCAR2Q8TDS4 363 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 IP6K1Q92551 441 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 MROQ9BYG7 248 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 ACP6Q9NPH0 428 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms