RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PSMA4P25789 261 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 CDKAL1Q5VV42 579 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 HDAC7Q8WUI4 952 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 KBTBD4Q9NVX7 518 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 GPR75-ASB3A0A0A6YYF3 556 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 TRAPPC3O43617 180 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 TMED10P49755 219 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 TBL3Q12788 808 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 ITPK1Q13572 414 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 ACOT1Q86TX2 421 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 BHMTQ93088 406 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 THUMPD3Q9BV44 507 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 WDCPQ9H6R7 721 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 MEI4A8MW99 385 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 NFIBO00712 420 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 C6orf222P0C671 652 aaPredicted RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 FAM200BP0CF97 657 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 SERPINB8P50452 374 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 ANGEL2Q5VTE6 544 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 SPOCD1Q6ZMY3 1216 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 LRRC6Q86X45 466 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 TUBGCP3Q96CW5 907 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 CPB2Q96IY4 423 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 RNF112Q9ULX5 631 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 PGK2P07205 417 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 ZNF23P17027 643 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 C4orf22Q6V702 233 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 RINLQ6ZS11 566 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 GPR141Q7Z602 305 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 P3H2Q8IVL5 708 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 BTN2A2Q8WVV5 523 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 SEMA4AQ9H3S1 761 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 CHST12Q9NRB3 414 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 PAIP2BQ9ULR5 123 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 AKAP3O75969 853 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 CLEC16AQ2KHT3 1053 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 C10orf120Q5SQS8 335 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEK4-201ENST00000233027 MICU2Q8IYU8 434 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 NMD3Q96D46 503 aaKnown RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 MAGEB2O15479 319 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 STIP1P31948 543 aaKnown RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 OR1G1P47890 313 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 FOXR1Q6PIV2 292 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 IZUMO2Q6UXV1 221 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 OTOAQ7RTW8 1153 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 CHSY1Q86X52 802 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 PNMA8BQ9ULN7 279 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 C19orf81C9J6K1 198 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 MZF1P28698 734 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 SOX10P56693 466 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 LAMB3Q13751 1172 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 ARHGEF7Q14155 803 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 KPNB1Q14974 876 aaKnown RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 DENND1BQ6P3S1 775 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 FAM172AQ8WUF8 416 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 YIPF2Q9BWQ6 316 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 PIF1Q9H611 641 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 DDIT4Q9NX09 232 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 USE1Q9NZ43 259 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 TAGLN3Q9UI15 199 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 ATP9AO75110 1047 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 RGS4P49798 205 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 TMEM237Q96Q45 408 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 PRR23D1E9PI22 279 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 DLGAP3O95886 979 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 PRR23D2P0DMB1 279 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 PSMC3P17980 439 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 CALB2P22676 271 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 HSPA13P48723 471 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 RUNX1T1Q06455 604 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 BNC2Q6ZN30 1099 aaPredicted RBP13.85□□□□□ -0.19
NEK4-201ENST00000233027 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 LINC00523Q86TU6 105 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 EMC1Q8N766 993 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 FAM151AQ8WW52 585 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 BBS2Q9BXC9 721 aa13.85□□□□□ -0.19
NEK4-201ENST00000233027 RIPK2O43353 540 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SASH3O75995 380 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 THRAP10827 490 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 CYP2C9P11712 490 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SERPINB1P30740 379 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 NPTX2P47972 431 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SKOR1P84550 965 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 TDRD5Q8NAT2 981 aaKnown RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 TNIP2Q8NFZ5 429 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms