RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SOD2P04179 222 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 KRT3P12035 628 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 BDNFP23560 247 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 PPM1AP35813 382 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 RPL7AP62424 266 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 DCUN1D2Q6PH85 259 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 NT5DC3Q86UY8 548 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 ZDHHC17Q8IUH5 632 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 ZMIZ2Q8NF64 920 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 CLP1Q92989 425 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 TLR10Q9BXR5 811 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 PCDHB12Q9Y5F1 795 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
SNRPD3-201ENST00000215829 LINC00271P0C7V0 271 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 CACNA2D1P54289 1103 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 MCEEQ96PE7 176 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 KCNK16Q96T55 309 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 RHOBTB2Q9BYZ6 727 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 TMEM30AQ9NV96 361 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 AMFRQ9UKV5 643 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 NLRC5Q86WI3 1866 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 PAPSS1O43252 624 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 NCK2O43639 380 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 TLL1O43897 1013 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 LCP1P13796 627 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 AMPD2Q01433 879 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 SLC6A3Q01959 620 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 KIAA1841Q6NSI8 718 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 PRSS55Q6UWB4 352 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 OLFML1Q6UWY5 402 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 RSPO2Q6UXX9 243 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 UBE2Q2Q8WVN8 375 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 PIK3R5Q8WYR1 880 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 FUBP3Q96I24 572 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 HERC2P3Q9BVR0 1158 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 MTRRQ9UBK8 725 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 LCMT1Q9UIC8 334 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 BACE2Q9Y5Z0 518 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 SAR1BQ9Y6B6 198 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 KIAA1671Q9BY89 1806 aa16.79■□□□□ 0.28
SNRPD3-201ENST00000215829 PTPRDP23468 1912 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 PRLRP16471 622 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 COMTP21964 271 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 RFC1P35251 1148 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 DSG1Q02413 1049 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 SMARCB1Q12824 385 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 GPR17Q13304 367 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 FAM102AQ5T9C2 384 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 LRRC4Q9HBW1 653 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 DMAP1Q9NPF5 467 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 METTL5Q9NRN9 209 aaKnown RBP16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 IP6K2Q9UHH9 426 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 SNX12Q9UMY4 172 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 PACSIN2Q9UNF0 486 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 HYOU1Q9Y4L1 999 aa16.78■□□□□ 0.28
SNRPD3-201ENST00000215829 HHLA1C9JL84 531 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 PROSCO94903 275 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 CYP2F1P24903 491 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 SCNN1AP37088 669 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 SLC1A1P43005 524 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 KRT17Q04695 432 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 TUBB2AQ13885 445 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 RPS6KA1Q15418 735 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 PSMD5Q16401 504 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 PTPROQ16827 1216 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 RAB41Q5JT25 222 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 JOSD2Q8TAC2 188 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 FNIP1Q8TF40 1166 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 TUBB2BQ9BVA1 445 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 TMEM59LQ9UK28 342 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 PCDHB5Q9Y5E4 795 aa16.77■□□□□ 0.28
SNRPD3-201ENST00000215829 CPB1P15086 417 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 GLUD2P49448 558 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 RABGGTBP53611 331 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 ARPP19P56211 112 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 ADIGQ0VDE8 80 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 VSTM1Q6UX27 236 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 KHSRPQ92945 711 aaKnown RBP eCLIP16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 PIWIL1Q96J94 861 aaKnown RBP16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 L2HGDHQ9H9P8 463 aa16.77■□□□□ 0.27
SNRPD3-201ENST00000215829 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms