RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RTKNQ9BST9 563 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 XYLT2Q9H1B5 865 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 DUS2Q9NX74 493 aaKnown RBP16.95■□□□□ 0.3
ERCC1-201ENST00000013807 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 ACACBO00763 2458 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 CLIC2O15247 247 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 AKAP3O75969 853 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 CKMP06732 381 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
ERCC1-201ENST00000013807 GRIK1P39086 918 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 AP3M2P53677 418 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 USP46P62068 366 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
ERCC1-201ENST00000013807 SLC7A9P82251 487 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 ZXDBP98169 803 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 PRR23BQ6ZRT6 265 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 MRPL45Q9BRJ2 306 aaKnown RBP16.94■□□□□ 0.3
ERCC1-201ENST00000013807 SEMA4GQ9NTN9 838 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 DMAC2Q9NW81 257 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 FAM13BQ9NYF5 915 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 USP18Q9UMW8 372 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 ABCA7Q8IZY2 2146 aa16.94■□□□□ 0.3
ERCC1-201ENST00000013807 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 KLRC4O43908 158 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 EGFP01133 1207 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SLFN14P0C7P3 912 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 PTPN1P18031 435 aaKnown RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 CASP1P29466 404 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 HOXC13P31276 330 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 RAP1GAPP47736 663 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SRSF5Q13243 272 aaKnown RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 CUL4BQ13620 913 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 KCNB1Q14721 858 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 LPAL2Q16609 132 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SYT13Q7L8C5 426 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 FAM160A2Q8N612 972 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SH3RF2Q8TEC5 729 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 PARD3BQ8TEW8 1205 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 EZH1Q92800 747 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SYAP1Q96A49 352 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 CCDC127Q96BQ5 260 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 ZC3H10Q96K80 434 aaKnown RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SNX25Q9H3E2 840 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 TRPC7Q9HCX4 862 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 SLC39A2Q9NP94 309 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 TRPM5Q9NZQ8 1165 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 CDV3Q9UKY7 258 aaKnown RBP16.93■□□□□ 0.3
ERCC1-201ENST00000013807 LAMA1P25391 3075 aa16.93■□□□□ 0.3
ERCC1-201ENST00000013807 EPG5Q9HCE0 2579 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 RNF40O75150 1001 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 ANXA13P27216 316 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 ME1P48163 572 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 CYP2J2P51589 502 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 TNNC1P63316 161 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 CYP27A1Q02318 531 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 NR1H3Q13133 447 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 PSMD2Q13200 908 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 HEATR6Q6AI08 1181 aaKnown RBP16.92■□□□□ 0.3
ERCC1-201ENST00000013807 NELFCDQ8IXH7 590 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 OR6B3Q8NGW1 331 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 CCDC26Q8TAB7 109 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 NETO1Q8TDF5 533 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 CD101Q93033 1021 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 LINC00597Q9H2U6 94 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 IL37Q9NZH6 218 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 EBF1Q9UH73 591 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 WNT6Q9Y6F9 365 aa16.92■□□□□ 0.3
ERCC1-201ENST00000013807 THADAQ6YHU6 1953 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 F8VP50 259 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 SLC30A4O14863 429 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
ERCC1-201ENST00000013807 C4BPAP04003 597 aaKnown RBP16.91■□□□□ 0.3
ERCC1-201ENST00000013807 MYL1P05976 194 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 AFMP43652 599 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 IFNAR2P48551 515 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 MYL6P60660 151 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 TRPC3Q13507 836 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 GAB4Q2WGN9 574 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 MDH1BQ5I0G3 518 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 PRR23CQ6ZRP0 262 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
ERCC1-201ENST00000013807 ADGRG2Q8IZP9 1017 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 PLEKHO2Q8TD55 490 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
ERCC1-201ENST00000013807 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 SLC8A2Q9UPR5 921 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms