RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Trpc3Q9QZC1 836 aa8.59□□□□□ -1.03
Trim40-203ENSMUST00000172711 Asb3Q9WV72 525 aa8.59□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ate1Q9Z2A5 516 aa8.59□□□□□ -1.03
Trim40-203ENSMUST00000172711 Hectd1Q69ZR2 2618 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cfap46E9Q2C0 2641 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 1700031M16RikA0A087WSH0 82 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Vsig10l2A0A140LHF2 776 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Acnat1A2AKK5 416 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cyp2t4E9PWV0 503 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Stk10O55098 966 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Aoc3O70423 765 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 AvpP35455 168 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Irf7P70434 457 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cct6aP80317 531 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tie1Q06806 1134 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cntn3Q07409 1028 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pik3r6Q3U6Q4 756 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 HecaQ3V1N5 544 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Fam160a1Q505K2 1081 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pde1cQ64338 706 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Slc7a6osQ7TPE5 306 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Camsap3Q80VC9 1252 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Adam29Q811Q4 763 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Epb41l5Q8BGS1 731 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfm2Q8BM13 448 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Fbxo38Q8BMI0 1194 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ttc24Q8BYG0 334 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Nt5dc1Q8C5P5 467 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Wdr27Q8C5V5 780 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Parp10Q8CIE4 960 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Acad9Q8JZN5 625 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Psmd2Q8VDM4 908 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Fam3cQ91VU0 227 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Pde2aQ922S4 916 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tom1l1Q923U0 474 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Stx6Q9JKK1 255 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Add1Q9QYC0 735 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Acot9Q9R0X4 439 aaKnown RBP8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 PignQ9R1S3 931 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Apobec2Q9WV35 224 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cdc7Q9Z0H0 564 aa8.58□□□□□ -1.04
Trim40-203ENSMUST00000172711 NbeaQ9EPN1 2936 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Zfc3h1B2RT41 1992 aaKnown RBP8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm38655A0A286YDK6 273 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tex13aA2AFS9 377 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rap1gapA2ALS5 663 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Nedd9O35177 833 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 TxkP42682 527 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Senp1P59110 640 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Adamts1P97857 968 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 CtrcQ3SYP2 268 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Aarsd1Q3THG9 412 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Fubp3Q3TIX6 575 aaKnown RBP8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ccser2Q3UHI0 833 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Kdm7aQ3UWM4 940 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Myl6Q60605 151 aaKnown RBP8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Asic1Q6NXK8 526 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfr119Q7TRJ5 321 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Usp37Q8C0R0 979 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Lgi4Q8K1S1 537 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Hnrnpul1Q8VDM6 859 aaKnown RBP8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Caskin2Q8VHK1 1201 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ipo4Q8VI75 1082 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Stk38Q91VJ4 465 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 SharpinQ91WA6 380 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 AdprmQ99KS6 340 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 MtapQ9CQ65 283 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Mms19Q9D071 1031 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Galnt15Q9D2N8 638 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Lat2Q9JHL0 203 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rai2Q9QVY8 529 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 GsdmeQ9Z2D3 512 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Dopey2Q3UHQ6 2295 aa8.57□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rai1Q61818 1889 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tmem235B1AQL3 211 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gm4846B2RWH8 538 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Anp32aO35381 247 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Eif3dO70194 548 aaKnown RBP8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 CtssO70370 340 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cd8aP01731 247 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Myl1P05977 188 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Chmp6P0C0A3 200 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tnnc2P20801 160 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Nfkb1P25799 971 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Tnnt2P50752 301 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Limk1P53668 647 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Atp6v1dP57746 247 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Cdh8P97291 799 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Sptlc2P97363 560 aaKnown RBP8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Ebf1Q07802 591 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gpr174Q3U507 335 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Zbtb16Q3UQ17 673 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Gas2l3Q3UWW6 683 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Usp28Q5I043 1051 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Sun3Q5SS91 320 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Olfr8Q60892 310 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 MslnQ61468 625 aa8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Dnajc1Q61712 552 aaKnown RBP8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Rrp12Q6P5B0 1295 aaKnown RBP8.56□□□□□ -1.04
Trim40-203ENSMUST00000172711 Atp1a3Q6PIC6 1013 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms