RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ccdc81Q9D5W4 654 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Ttc9bQ9D6E4 239 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Hsd3b7Q9EQC1 369 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gabbr1Q9WV18 960 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Krt16Q9Z2K1 469 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Scgb2b7D3YYY1 112 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Foxn2E9Q7L6 429 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Stt3bQ3TDQ1 823 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 ItgadQ3V0T4 1168 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Xpo1Q6P5F9 1071 aaKnown RBP22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Zbtb6Q8K088 423 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Tbc1d19Q8VDV7 526 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pcdhb1Q91Y08 818 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Bbox1Q924Y0 387 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Fgf22Q9ESS2 162 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gfra4Q9JJT2 260 aa22.25■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rfx8D3YU81 596 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Vmn2r19G5E8G4 854 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gm11236J3QMS7 360 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Vsnl1P62761 191 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Serpina5P70458 405 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Cpne7Q0VE82 557 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rbm20Q3UQS8 1199 aaKnown RBP22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pde1cQ64338 706 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Daam1Q8BPM0 1077 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Cwh43Q91YL7 699 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Trps1Q925H1 1281 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Piwil1Q9JMB7 862 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Bnip3lQ9Z2F7 218 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Scgb2b12S4R2L0 112 aa22.24■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Slc23a4A0A0J9YUX7 615 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Zfp174B9EJW5 407 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 TpteG5E8H5 664 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rgs2O08849 211 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Becn2P0DM65 447 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rasgrf1P27671 1262 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 TktP40142 623 aaKnown RBP22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Wdr5P61965 334 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Hdhd2Q3UGR5 259 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gm5168Q4KL04 211 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Cfhr2Q4LDF6 332 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Slc20a1Q61609 681 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Ublcp1Q8BGR9 318 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pak4Q8BTW9 593 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rsl1d1Q8BVY0 452 aaKnown RBP22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pak2Q8CIN4 524 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Fermt3Q8K1B8 665 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pcdha11Q91Y19 950 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Dnajb4Q9D832 337 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Homer2Q9QWW1 354 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Peg12Q9WVA7 283 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rp1l1Q8CGM2 1859 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 D3Z070 196 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Fam124aD3Z5V4 536 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pbx2O35984 430 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Acot1O55137 419 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Tcf4Q60722 670 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Papss1Q60967 624 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Nr2e1Q64104 385 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pnpla2Q8BJ56 486 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Mageb18Q8BQR7 327 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Uroc1Q8VC12 676 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Dnajc28Q8VCE1 385 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pard3bQ9CSB4 1203 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 MtrexQ9CZU3 1040 aaKnown RBP22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Acox2Q9QXD1 681 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Epm2aQ9WUA5 330 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Krt27Q9Z320 448 aa22.23■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 4930402K13RikB1AW18 415 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Lipo2D3YY49 398 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 P01652 108 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Hoxb8P09632 243 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Adamts1P97857 968 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Ppp2r5eQ61151 467 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Agbl3Q8CDP0 1006 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Lmcd1Q8VEE1 365 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 DeraQ91YP3 318 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Ugp2Q91ZJ5 508 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Satl1Q9D5N8 744 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 3830403N18RikQ9D6C3 208 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Rab13Q9DD03 202 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 CenphQ9QYM8 241 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Zranb2Q9R020 330 aaKnown RBP22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 CitP49025 2055 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Znf106O88466 1888 aa22.22■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Plin4O88492 1403 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Trappc3O55013 180 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Dync1i1O88485 628 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Fgfr1P16092 822 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Epha3P29319 983 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Slc1a2P43006 572 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Ntrk3Q6VNS1 825 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Npas4Q8BGD7 802 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Nlrp4aQ8BU40 982 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Csnk1g3Q8C4X2 424 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Tp53inp2Q8CFU8 221 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Kat14Q8CID0 779 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Colgalt1Q8K297 617 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 ToporslQ9D2F8 683 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gins2Q9D600 185 aa22.21■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms