RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 DnerQ8JZM4 737 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Adgrg3Q8R0T6 542 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Spats2lQ91WJ7 558 aaKnown RBP8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 4930519G04RikQ9CPT7 205 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Gadd45gip1Q9CR59 222 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Lrp2bpQ9D4C6 346 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ubr2Q6WKZ8 1755 aa8.14□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Myo5bP21271 1818 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 4933424G06RikA0A140LIP3 267 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Fam71f2B2RXB0 297 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Itga5P11688 1053 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Pax3P24610 479 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ccnb1P24860 430 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Cap1P40124 474 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 MlxipQ2VPU4 917 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Llgl2Q3TJ91 1027 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Glg1Q61543 1175 aaKnown RBP8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Pdcd4Q61823 469 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Colgalt2Q6NVG7 625 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ccdc25Q78PG9 208 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ccdc93Q7TQK5 629 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 MafaQ8CF90 359 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Arfip2Q8K221 341 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 RabepkQ8VCH5 380 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Mfsd5Q921Y4 450 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Syf2Q9D198 242 aaKnown RBP8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 PpbpQ9EQI5 113 aa8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ammecr1Q9JHT5 344 aaKnown RBP8.13□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Prss32E9Q409 334 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Nr4a1P12813 601 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Cd86P42082 309 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Snrpa1P57784 255 aaKnown RBP8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Myo1fP70248 1099 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 ArvcfP98203 962 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 CkbQ04447 381 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Armc7Q3UJZ3 198 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Wdr93Q402B2 695 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Fbln7Q501P1 440 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 CmahQ61419 577 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Rhbdf1Q6PIX5 856 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Acbd3Q8BMP6 525 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 AgmoQ8BS35 447 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Aldh5a1Q8BWF0 523 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Eif3bQ8JZQ9 803 aaKnown RBP8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Txndc11Q8K2W3 948 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ocel1Q8VCR9 219 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Dlgap1Q9D415 992 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Klc4Q9DBS5 619 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Mxra8Q9DBV4 442 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Sorcs2Q9EPR5 1159 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Panx1Q9JIP4 426 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Cog8Q9JJA2 640 aa8.12□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Catsperg2C6KI89 1145 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Catsperg1E9Q355 1151 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Olfr1249L7MU51 318 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Glb1l2Q3UPY5 636 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Slc47a2Q3V050 573 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 ItgaeQ60677 1167 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Wwc2Q6NXJ0 1187 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 CtifQ6PEE2 600 aaKnown RBP8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Prss43Q76HL1 382 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 PicalmQ7M6Y3 660 aaKnown RBP8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Asic4Q7TNS7 539 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Rps6kc1Q8BLK9 1056 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Prss45Q8K4I7 317 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Bcdin3dQ91YP1 285 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 HypkQ9CR41 129 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Slc39a5Q9D856 535 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Dclk1Q9JLM8 756 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Pkp3Q9QY23 797 aa8.11□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 TnikP83510 1323 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Rsg1A2A825 258 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Zscan5bB2RTN3 468 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Kif28pD3YXS5 1028 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Cyp2j8G3UZ38 503 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Gm7137J3QMW1 236 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Mapkapk5O54992 473 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ly86O88188 162 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ercc3P49135 783 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Q3TQI7 289 aaKnown RBP8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Taar2Q5QD17 339 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Arhgap30Q640N3 1101 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Olfr834Q7TRG8 312 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Thoc5Q8BKT7 683 aaKnown RBP8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Gle1Q8R322 699 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Pcdhgb5Q91XX5 926 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Anp32bQ9EST5 272 aaKnown RBP8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Htra2Q9JIY5 458 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Tnfrsf10bQ9QZM4 381 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Crb1Q8VHS2 1405 aa8.1□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Zfp760E9QAF5 666 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Vmn2r60L7N2A1 853 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Wnt3P17553 355 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Lta4hP24527 611 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Hmgb2P30681 210 aaKnown RBP8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 DSCC1Q14AI0 399 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Mybpc2Q5XKE0 1136 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Tsg101Q61187 391 aa8.09□□□□□ -1.11
Ccdc54-201ENSMUST00000062439 Ezh2Q61188 746 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms