RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ripk2P58801 539 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Bpifb5Q3UQ05 490 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Antxr2Q6DFX2 487 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 ItchQ8C863 864 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc13a3Q91Y63 600 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atpaf2Q91YY4 289 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ttc30bQ9CY00 664 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PorcnQ9JJJ7 461 aa10.7□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oip5A2AQ14 241 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Skint3A7TZF0 458 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hsd17b4P51660 735 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atp5bP56480 529 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppp1r13lQ5I1X5 824 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PnocQ64387 187 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atp4aQ64436 1033 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 E2f7Q6S7F2 904 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 TdrkhQ80VL1 560 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Trim36Q80WG7 729 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Q80WR5 230 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 C2cd2lQ80X80 706 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rbm12b1Q80YR9 836 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Nod1Q8BHB0 953 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gpr150Q8BL07 427 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 NkrfQ8BY02 690 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Phactr3Q8BYK5 558 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Col23a1Q8K4G2 532 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pglyrp2Q8VCS0 530 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ndufaf1Q9CWX2 328 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Topaz1E5FYH1 1653 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc16a1P53986 493 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Samd11Q1RNF8 542 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ica1lQ3TY65 431 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ssxb5Q6XAS2 159 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Colgalt1Q8K297 617 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Basp1Q91XV3 226 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pdxdc1Q99K01 787 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Eps8l2Q99K30 729 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ndufaf7Q9CWG8 436 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Snx29Q9D3S3 818 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 CrotQ9DC50 612 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Limd1Q9QXD8 668 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mapk13Q9Z1B7 366 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ism1A2ATD1 454 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zfp788E9Q980 884 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppp3caP63328 521 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hnrnph2P70333 449 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atxn7l3bQ3UD01 97 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fam120bQ6RI63 786 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 RubcnQ80U62 956 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Usp8Q80U87 1080 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 TxlngQ8BHN1 524 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Znf879Q8BI99 563 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mcoln2Q8K595 566 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Taf1dQ9D4V4 322 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sapcd2Q9D818 391 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 NfkbizQ9EST8 728 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sertad2Q9JJG5 309 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr271-ps1A0A1L1SQH2 283 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc4a9E9PUP3 929 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gm5689F6Y2A6 97 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Drg1P32233 367 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 CstaP56567 97 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmcc1Q69ZZ6 649 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc20a2Q80UP8 656 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Dhx32Q8BZS9 744 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tada2aQ8CHV6 443 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Spata9Q9D9R3 252 aa10.69□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oas1fQ14AZ4 364 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc10a5Q5PT54 434 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Kirrel3Q8BR86 778 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ascc2Q91WR3 749 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PmpcbQ9CXT8 489 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Noxred1Q9D3S5 366 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pik3cgQ9JHG7 1102 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 MkksQ9JI70 570 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fads3Q9JJE7 449 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Cdkl2Q9QUK0 568 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc26a3Q9WVC8 757 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Wdr49A0A0N4SUK7 710 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Klhl41A2AUC9 606 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Atf6F6VAN0 656 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Scd1P13516 355 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Wnt7aP24383 349 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hoxa11P31311 313 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rpl36P47964 105 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Etv6P97360 485 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Smyd1P97443 490 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc38a5Q3U1J0 479 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gpd1lQ3ULJ0 351 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sdf4Q61112 361 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ripor1Q68FE6 1223 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Armc12Q80X86 340 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Trpa1Q8BLA8 1125 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ythdf3Q8BYK6 585 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Afap1l1Q8BZI0 768 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 AmotQ8VHG2 1126 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ubxn11Q9D572 484 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Kbtbd12Q9D618 625 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Prg3Q9JL95 222 aa10.68□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcdh7A0A0A6YY83 1255 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms