RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Srsf11E9Q6E5 511 aaKnown RBP11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 GsnP13020 780 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Aco1P28271 889 aaKnown RBP11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gad2P48320 585 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 PkmP52480 531 aaKnown RBP11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Serpina1eQ00898 413 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rmdn3Q3UJU9 470 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 MyrfQ3UR85 1138 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 SnrpaQ62189 287 aaKnown RBP11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ripor1Q68FE6 1223 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 WlsQ6DID7 541 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 HpseQ6YGZ1 535 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fbxw8Q8BIA4 598 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Klhl38Q8BSF5 581 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Nsl1Q8K305 281 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tagln3Q9R1Q8 199 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zscan12Q9Z1D7 501 aa11.09□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Znfx1Q8R151 1909 aaKnown RBP11.08□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Inpp5aE9QAS7 422 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 ZfaP23607 742 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Fbln1Q08879 705 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Znf367Q0VDT2 340 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Prkaa1Q5EG47 559 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tpd52Q62393 224 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Vmn2r43Q80Z08 845 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 FsbpQ8BKE5 299 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Abraxas1Q8BPZ8 407 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rmnd1Q8CI78 450 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Prpsap2Q8R574 369 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Med15Q924H2 789 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Abcg3Q99P81 650 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pabpc6Q9D4E6 643 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ror1Q9Z139 937 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Myh13B1AR69 1938 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Hnrnph3D3Z3N4 346 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Olfr292F8VQ84 308 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Spin2fJ3QPU0 254 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grk4O70291 574 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Stx1bP61264 288 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Mark2Q05512 776 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tfdp1Q08639 410 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 InscQ3HNM7 579 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pik3r5Q5SW28 871 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grb10Q60760 621 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 GnptabQ69ZN6 1235 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 UnkQ8BL48 810 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rmdn2Q8BSE0 410 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ago2Q8CJG0 860 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cnot6Q8K3P5 557 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grhl1Q921D9 618 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Dnajc19Q9CQV7 116 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 YwhabQ9CQV8 246 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 1700123K08RikQ9D991 295 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Mcf2A2AEU1 1111 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rap1gapA2ALS5 663 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Arpp19P56212 112 aaKnown RBP11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Inf2Q0GNC1 1273 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tmcc1Q69ZZ6 649 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ccdc85bQ6PDY0 202 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Zfp341Q6PGC9 846 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Impg2Q80XH2 1243 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Epb41l5Q8BGS1 731 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Lca5lQ8C0X0 741 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Sumf1Q8R0F3 372 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Crtc3Q91X84 619 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ccdc77Q9CZH8 489 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Spata1Q9D5R4 444 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Oma1Q9D8H7 521 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pou5f2Q9DAC9 329 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Morf4l2Q9R0Q4 288 aa11.08□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Fam205aA2APU8 1308 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 GabreA2AMW3 916 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Actr2P61161 394 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Serpina1dQ00897 413 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Olfm4Q3UZZ4 505 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Spag6Q3V0U9 509 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cnot7Q60809 285 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 RimklbQ80WS1 387 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ptk7Q8BKG3 1062 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pnma1Q8C1C8 353 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Fbxl5Q8C2S5 690 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rbmx2Q8R0F5 326 aaKnown RBP11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Hdhd5Q91WM2 419 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Asb11Q9CQ31 323 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ndufaf1Q9CWX2 328 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gpatch1Q9DBM1 930 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tlr5Q9JLF7 859 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rbck1Q9WUB0 508 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Bcl10Q9Z0H7 233 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Myh7Q91Z83 1935 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ccdc88cQ6VGS5 2009 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Wdr49A0A0N4SUK7 710 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Kpna7C0LLJ0 499 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ptar1E9QAB6 424 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ebf2O08792 575 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pstpip1P97814 415 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 EgfrQ01279 1210 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Mfhas1Q3V1N1 1048 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tigd5Q499M4 642 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Znf652Q5DU09 608 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms