RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	FCF1	Q05498	189 aa	Predicted RBP	5.47	□□□□□ -1.53
SNT309	YPR101W	YLR296W	Q05898	108 aa		5.47	□□□□□ -1.53
SNT309	YPR101W	PBP4	Q07362	185 aa	Known RBP	5.47	□□□□□ -1.53
SNT309	YPR101W	IRC23	Q08416	157 aa		5.47	□□□□□ -1.53
SNT309	YPR101W	DGA1	Q08650	418 aa		5.47	□□□□□ -1.53
SNT309	YPR101W	AQY1	P0CD91	305 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	YHL044W	P38727	235 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	SNU13	P39990	126 aa	Known RBP	5.46	□□□□□ -1.54
SNT309	YPR101W	YPL073C	P40323	161 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	CIN5	P40917	295 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	TOS6	P48560	102 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	GEP3	Q08622	556 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	YPL257W	Q08974	193 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	YLR112W	Q12130	139 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	FCY1	Q12178	158 aa		5.46	□□□□□ -1.54
SNT309	YPR101W	HYP2	P23301	157 aa	Known RBP	5.45	□□□□□ -1.54
SNT309	YPR101W	PCL2	P25693	308 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	POP7	P38291	140 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	SPI1	P40092	148 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	BNA1	P47096	177 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	SBH2	P52871	88 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	YGL260W	P53056	76 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	DIA1	P54005	336 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	ELC1	Q03071	99 aa		5.45	□□□□□ -1.54
SNT309	YPR101W	YGR219W	P53307	113 aa		5.44	□□□□□ -1.54
SNT309	YPR101W	ATP23	P53722	227 aa		5.44	□□□□□ -1.54
SNT309	YPR101W	YOL160W	Q08321	113 aa		5.44	□□□□□ -1.54
SNT309	YPR101W	YKL070W	P36087	169 aa		5.43	□□□□□ -1.54
SNT309	YPR101W	YKR041W	P36134	250 aa		5.43	□□□□□ -1.54
SNT309	YPR101W	SLO1	Q3E784	85 aa		5.43	□□□□□ -1.54
SNT309	YPR101W	ADH1	P00330	348 aa	Known RBP	5.42	□□□□□ -1.54
SNT309	YPR101W	HMRA2	P0CY13	119 aa		5.42	□□□□□ -1.54
SNT309	YPR101W	KTI12	P34253	313 aa	Known RBP	5.42	□□□□□ -1.54
SNT309	YPR101W	MIC12	P38341	106 aa		5.42	□□□□□ -1.54
SNT309	YPR101W	SNF11	P38956	169 aa		5.42	□□□□□ -1.54
SNT309	YPR101W	MRPL49	P40858	161 aa	Predicted RBP	5.42	□□□□□ -1.54
SNT309	YPR101W	DFM1	Q12743	341 aa	Known RBP	5.42	□□□□□ -1.54
SNT309	YPR101W	COA3	Q3E7B2	85 aa		5.42	□□□□□ -1.54
SNT309	YPR101W	RPL32	P38061	130 aa	Known RBP	5.41	□□□□□ -1.54
SNT309	YPR101W	SCW10	Q04951	389 aa		5.41	□□□□□ -1.54
SNT309	YPR101W	RPL42A	P0CX27	106 aa	Known RBP	5.4	□□□□□ -1.54
SNT309	YPR101W	RPL42B	P0CX28	106 aa	Known RBP	5.4	□□□□□ -1.54
SNT309	YPR101W	AGA1	P32323	725 aa		5.4	□□□□□ -1.54
SNT309	YPR101W	YER181C	P40097	107 aa		5.4	□□□□□ -1.54
SNT309	YPR101W	WWM1	P43582	211 aa	Known RBP	5.4	□□□□□ -1.54
SNT309	YPR101W	LCB3	P47013	409 aa		5.4	□□□□□ -1.54
SNT309	YPR101W	YPL261C	Q08976	102 aa		5.4	□□□□□ -1.54
SNT309	YPR101W	RDL1	Q12305	139 aa	Known RBP	5.4	□□□□□ -1.54
SNT309	YPR101W	YNL217W	P40152	326 aa		5.39	□□□□□ -1.55
SNT309	YPR101W	YNL194C	P40169	301 aa		5.39	□□□□□ -1.55
SNT309	YPR101W	CYC7	P00045	113 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	SPS100	P13130	326 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	DUT1	P33317	147 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	URM1	P40554	99 aa	Predicted RBP	5.38	□□□□□ -1.55
SNT309	YPR101W	GLO1	P50107	326 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	NCE103	P53615	221 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
SNT309	YPR101W	IGO2	Q9P305	131 aa		5.38	□□□□□ -1.55
SNT309	YPR101W	TOR2	P32600	2474 aa	Known RBP	5.38	□□□□□ -1.55
SNT309	YPR101W	YPT53	P36019	220 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	YHR022C	P38763	256 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	OXA1	P39952	402 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	YEL067C	P39978	195 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	YMR181C	Q03231	154 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	CCW12	Q12127	133 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	YOR008C-A	Q3E7B9	74 aa		5.37	□□□□□ -1.55
SNT309	YPR101W	YIR020C	P40575	100 aa		5.36	□□□□□ -1.55
SNT309	YPR101W	KEG1	P43614	200 aa		5.36	□□□□□ -1.55
SNT309	YPR101W	YNR077C	P53758	84 aa		5.36	□□□□□ -1.55
SNT309	YPR101W	YOR097C	Q12274	175 aa	Predicted RBP	5.36	□□□□□ -1.55
SNT309	YPR101W	NHP2	P32495	156 aa	Predicted RBP	5.35	□□□□□ -1.55
SNT309	YPR101W	ABM1	P47146	123 aa		5.35	□□□□□ -1.55
SNT309	YPR101W	YML122C	Q03207	126 aa		5.35	□□□□□ -1.55
SNT309	YPR101W	MSA1	Q08471	629 aa		5.35	□□□□□ -1.55
SNT309	YPR101W	SPO24	Q3E752	67 aa		5.35	□□□□□ -1.55
SNT309	YPR101W	YBR200W-A	Q3E755	54 aa		5.35	□□□□□ -1.55
SNT309	YPR101W	CCW14	O13547	238 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	VAR1	P02381	398 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	YDL022C-A	P0C5L6	82 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	CDC43	P18898	376 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	DUO1	P53168	247 aa	Known RBP	5.34	□□□□□ -1.55
SNT309	YPR101W	YGR025W	P53216	100 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	AIM11	P87275	137 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	LSM6	Q06406	86 aa	Known RBP	5.34	□□□□□ -1.55
SNT309	YPR101W	TMC1	Q08422	150 aa	Predicted RBP	5.34	□□□□□ -1.55
SNT309	YPR101W	PRM3	Q08931	133 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	YNL146C-A	Q3E7Z1	64 aa		5.34	□□□□□ -1.55
SNT309	YPR101W	RPS8A	P0CX39	200 aa	Known RBP	5.33	□□□□□ -1.56
SNT309	YPR101W	RPS8B	P0CX40	200 aa	Known RBP	5.33	□□□□□ -1.56
SNT309	YPR101W	INO2	P26798	304 aa		5.33	□□□□□ -1.56
SNT309	YPR101W	DCV1	P43595	202 aa		5.33	□□□□□ -1.56
SNT309	YPR101W	YIP3	P53633	176 aa		5.33	□□□□□ -1.56
SNT309	YPR101W	TIM10	P87108	93 aa		5.33	□□□□□ -1.56
SNT309	YPR101W	YLR194C	Q05777	254 aa		5.33	□□□□□ -1.56
SNT309	YPR101W	VMA11	P32842	164 aa		5.32	□□□□□ -1.56
SNT309	YPR101W	AIM34	Q03673	198 aa		5.32	□□□□□ -1.56
SNT309	YPR101W	MRPL23	Q12487	163 aa	Predicted RBP	5.32	□□□□□ -1.56
SNT309	YPR101W	ATX1	P38636	73 aa		5.31	□□□□□ -1.56
SNT309	YPR101W	YFR057W	P43625	151 aa		5.31	□□□□□ -1.56
SNT309	YPR101W	TOS8	P53147	276 aa		5.31	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 111.6 ms