RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SEC7P11075 2009 aaKnown RBP-0.62□□□□□ -2.51
SGF11YPL047W ADK1P07170 222 aaKnown RBP-0.62□□□□□ -2.51
SGF11YPL047W YGR039WP53225 103 aa-0.62□□□□□ -2.51
SGF11YPL047W ELC1Q03071 99 aa-0.62□□□□□ -2.51
SGF11YPL047W URB1P34241 1764 aaKnown RBP-0.62□□□□□ -2.51
SGF11YPL047W RPL14AP36105 138 aaKnown RBP-0.63□□□□□ -2.51
SGF11YPL047W RPL14BP38754 138 aaKnown RBP-0.63□□□□□ -2.51
SGF11YPL047W HPM1P40481 377 aa-0.63□□□□□ -2.51
SGF11YPL047W MOG1P47123 218 aa-0.63□□□□□ -2.51
SGF11YPL047W ERV14P53173 138 aa-0.63□□□□□ -2.51
SGF11YPL047W YIL014C-AQ02598 104 aa-0.63□□□□□ -2.51
SGF11YPL047W RPO41P13433 1351 aaKnown RBP-0.63□□□□□ -2.51
SGF11YPL047W SEC59P20048 519 aa-0.64□□□□□ -2.51
SGF11YPL047W YFR009W-AP0C5M9 85 aa-0.65□□□□□ -2.51
SGF11YPL047W ARC19P33204 171 aaKnown RBP-0.65□□□□□ -2.51
SGF11YPL047W SHU1P38751 150 aa-0.65□□□□□ -2.51
SGF11YPL047W TVP18Q04767 167 aa-0.65□□□□□ -2.51
SGF11YPL047W SPC3Q12133 184 aa-0.65□□□□□ -2.51
SGF11YPL047W YRF1-6P53819 1859 aa-0.65□□□□□ -2.51
SGF11YPL047W YNL198CP40166 100 aa-0.66□□□□□ -2.52
SGF11YPL047W MPC1P53157 130 aaKnown RBP-0.66□□□□□ -2.52
SGF11YPL047W YPK9Q12697 1472 aa-0.67□□□□□ -2.52
SGF11YPL047W YIL086CP40503 102 aa-0.67□□□□□ -2.52
SGF11YPL047W RBL2P48606 106 aaKnown RBP-0.67□□□□□ -2.52
SGF11YPL047W YLR363W-AQ3E747 85 aa-0.67□□□□□ -2.52
SGF11YPL047W SLO1Q3E784 85 aa-0.67□□□□□ -2.52
SGF11YPL047W HMRA2P0CY13 119 aa-0.68□□□□□ -2.52
SGF11YPL047W TRM732Q03496 1420 aa-0.68□□□□□ -2.52
SGF11YPL047W YIL134C-AQ45U18 67 aa-0.68□□□□□ -2.52
SGF11YPL047W YLR255CO13574 117 aa-0.69□□□□□ -2.52
SGF11YPL047W PET54P10834 293 aa-0.69□□□□□ -2.52
SGF11YPL047W YKL044WP36092 106 aa-0.69□□□□□ -2.52
SGF11YPL047W COX23P38824 151 aa-0.69□□□□□ -2.52
SGF11YPL047W GPI19Q04082 140 aa-0.69□□□□□ -2.52
SGF11YPL047W DNA2P38859 1522 aa-0.69□□□□□ -2.52
SGF11YPL047W RSF2P46974 1380 aa-0.7□□□□□ -2.52
SGF11YPL047W YJL197C-AP0C5P0 93 aa-0.7□□□□□ -2.52
SGF11YPL047W PAU12P53343 120 aa-0.7□□□□□ -2.52
SGF11YPL047W CNL1Q06333 122 aa-0.7□□□□□ -2.52
SGF11YPL047W FRQ1Q06389 190 aa-0.7□□□□□ -2.52
SGF11YPL047W PCC1Q3E833 88 aa-0.7□□□□□ -2.52
SGF11YPL047W YBR056W-AI2HB52 66 aa-0.71□□□□□ -2.52
SGF11YPL047W RPS11AP0CX47 156 aaKnown RBP-0.71□□□□□ -2.52
SGF11YPL047W RPS11BP0CX48 156 aaKnown RBP-0.71□□□□□ -2.52
SGF11YPL047W YBR016WP38216 128 aa-0.71□□□□□ -2.52
SGF11YPL047W MPC2P38857 129 aa-0.71□□□□□ -2.52
SGF11YPL047W HYM1P32464 399 aa-0.72□□□□□ -2.52
SGF11YPL047W SNF11P38956 169 aa-0.72□□□□□ -2.52
SGF11YPL047W PAM16P42949 149 aa-0.72□□□□□ -2.52
SGF11YPL047W YGR042WP53227 271 aa-0.72□□□□□ -2.52
SGF11YPL047W YOR097CQ12274 175 aaPredicted RBP-0.72□□□□□ -2.52
SGF11YPL047W YCL048W-AQ2V2Q2 79 aa-0.72□□□□□ -2.52
SGF11YPL047W OST5Q92316 86 aa-0.72□□□□□ -2.52
SGF11YPL047W RAD50P12753 1312 aa-0.72□□□□□ -2.52
SGF11YPL047W TOP2P06786 1428 aaKnown RBP-0.72□□□□□ -2.53
SGF11YPL047W RIM15P43565 1770 aa-0.73□□□□□ -2.53
SGF11YPL047W YOR1P53049 1477 aa-0.73□□□□□ -2.53
SGF11YPL047W ACP1P32463 125 aa-0.73□□□□□ -2.53
SGF11YPL047W TRS20P38334 175 aa-0.73□□□□□ -2.53
SGF11YPL047W YHR130CP38834 111 aa-0.73□□□□□ -2.53
SGF11YPL047W CSN9Q03981 162 aa-0.73□□□□□ -2.53
SGF11YPL047W CYC2P38909 366 aa-0.74□□□□□ -2.53
SGF11YPL047W GIM4P40005 111 aaKnown RBP-0.74□□□□□ -2.53
SGF11YPL047W RPC10P40422 70 aa-0.74□□□□□ -2.53
SGF11YPL047W SNN1P48232 102 aa-0.74□□□□□ -2.53
SGF11YPL047W RPL22BP56628 122 aaKnown RBP-0.74□□□□□ -2.53
SGF11YPL047W YPL261CQ08976 102 aa-0.74□□□□□ -2.53
SGF11YPL047W COX19Q3E731 98 aa-0.74□□□□□ -2.53
SGF11YPL047W CHD1P32657 1468 aa-0.74□□□□□ -2.53
SGF11YPL047W IMP2P46972 177 aa-0.75□□□□□ -2.53
SGF11YPL047W YGR164WP53291 111 aa-0.75□□□□□ -2.53
SGF11YPL047W YOR376W-AQ3E805 51 aa-0.75□□□□□ -2.53
SGF11YPL047W YJR107C-AP0CT86 78 aa-0.76□□□□□ -2.53
SGF11YPL047W PAU24P38155 120 aa-0.76□□□□□ -2.53
SGF11YPL047W POP7P38291 140 aa-0.76□□□□□ -2.53
SGF11YPL047W TDA2P40045 126 aa-0.76□□□□□ -2.53
SGF11YPL047W SAE3P89114 91 aa-0.76□□□□□ -2.53
SGF11YPL047W SPC24Q04477 213 aa-0.76□□□□□ -2.53
SGF11YPL047W LSM6Q06406 86 aaKnown RBP-0.76□□□□□ -2.53
SGF11YPL047W YNL277W-AQ3E7Z0 62 aa-0.76□□□□□ -2.53
SGF11YPL047W UTP20P35194 2493 aaKnown RBP-0.77□□□□□ -2.53
SGF11YPL047W Q0144Q9ZZW2 109 aa-0.77□□□□□ -2.53
SGF11YPL047W YCR101CP25607 182 aa-0.78□□□□□ -2.53
SGF11YPL047W GAT4P40569 121 aa-0.78□□□□□ -2.53
SGF11YPL047W YOL118CQ08259 102 aa-0.78□□□□□ -2.53
SGF11YPL047W YPL038W-AQ3E7B4 63 aa-0.78□□□□□ -2.53
SGF11YPL047W YCR108CQ3E819 63 aa-0.78□□□□□ -2.53
SGF11YPL047W PAU2P32612 120 aa-0.79□□□□□ -2.54
SGF11YPL047W DAD1Q12248 94 aa-0.79□□□□□ -2.54
SGF11YPL047W YIR020CP40575 100 aa-0.8□□□□□ -2.54
SGF11YPL047W PAU19P0CE85 124 aa-0.81□□□□□ -2.54
SGF11YPL047W PAU3P25610 124 aa-0.81□□□□□ -2.54
SGF11YPL047W YER187WP40102 141 aa-0.81□□□□□ -2.54
SGF11YPL047W SFT1P43682 97 aa-0.81□□□□□ -2.54
SGF11YPL047W AIM11P87275 137 aa-0.81□□□□□ -2.54
SGF11YPL047W COX12Q01519 83 aa-0.82□□□□□ -2.54
SGF11YPL047W YIR021W-AQ3E739 70 aa-0.82□□□□□ -2.54
SGF11YPL047W RPS20P38701 121 aaKnown RBP-0.83□□□□□ -2.54
SGF11YPL047W MRX7P53869 86 aa-0.83□□□□□ -2.54
SGF11YPL047W YDR381C-AQ3E6R5 114 aa-0.83□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms