RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C POM33Q12164 279 aa4.33□□□□□ -1.72
UBC11YOR339C TMA17Q12513 150 aa4.33□□□□□ -1.72
UBC11YOR339C YCR024C-BQ3E7Z8 88 aa4.33□□□□□ -1.72
UBC11YOR339C RPL23AP0CX41 137 aaKnown RBP4.32□□□□□ -1.72
UBC11YOR339C RPL23BP0CX42 137 aaKnown RBP4.32□□□□□ -1.72
UBC11YOR339C YCR001WP25347 104 aa4.32□□□□□ -1.72
UBC11YOR339C YRA2P36036 203 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
UBC11YOR339C SUR2P38992 349 aa4.32□□□□□ -1.72
UBC11YOR339C RRT13P40042 185 aa4.32□□□□□ -1.72
UBC11YOR339C BRP1P53194 125 aa4.32□□□□□ -1.72
UBC11YOR339C YDR366CP87287 132 aa4.32□□□□□ -1.72
UBC11YOR339C SCW10Q04951 389 aa4.32□□□□□ -1.72
UBC11YOR339C DXO1Q06349 442 aa4.32□□□□□ -1.72
UBC11YOR339C RDS3Q06835 107 aaPredicted RBP4.32□□□□□ -1.72
UBC11YOR339C FSF1Q12029 327 aaKnown RBP4.32□□□□□ -1.72
UBC11YOR339C RPS22BQ3E7Y3 130 aaKnown RBP4.32□□□□□ -1.72
UBC11YOR339C CYC7P00045 113 aa4.31□□□□□ -1.72
UBC11YOR339C SEC4P07560 215 aaKnown RBP4.31□□□□□ -1.72
UBC11YOR339C FRS1P15624 595 aaKnown RBP4.31□□□□□ -1.72
UBC11YOR339C SDH8P38345 138 aa4.31□□□□□ -1.72
UBC11YOR339C YGR149WP48236 432 aa4.31□□□□□ -1.72
UBC11YOR339C CYT2Q00873 224 aa4.31□□□□□ -1.72
UBC11YOR339C ARL3Q02804 198 aa4.31□□□□□ -1.72
UBC11YOR339C WIP1Q2V2P8 89 aa4.31□□□□□ -1.72
UBC11YOR339C YKR032WP36127 104 aa4.3□□□□□ -1.72
UBC11YOR339C AIM34Q03673 198 aa4.3□□□□□ -1.72
UBC11YOR339C MRPL28P36527 147 aa4.29□□□□□ -1.72
UBC11YOR339C ELF1P36053 145 aa4.28□□□□□ -1.72
UBC11YOR339C PET8P38921 284 aa4.28□□□□□ -1.72
UBC11YOR339C YCH1P42937 148 aa4.28□□□□□ -1.72
UBC11YOR339C YPS5P53057 165 aa4.28□□□□□ -1.72
UBC11YOR339C TVP18Q04767 167 aa4.28□□□□□ -1.72
UBC11YOR339C YLR042CQ07990 161 aa4.28□□□□□ -1.72
UBC11YOR339C VAM10Q08474 114 aa4.28□□□□□ -1.72
UBC11YOR339C ATP16Q12165 160 aa4.28□□□□□ -1.72
UBC11YOR339C YCR075W-AQ3E830 75 aa4.28□□□□□ -1.72
UBC11YOR339C KTI12P34253 313 aaKnown RBP4.27□□□□□ -1.73
UBC11YOR339C SGF11Q03067 99 aa4.27□□□□□ -1.73
UBC11YOR339C YBR126W-AQ8TGU7 68 aa4.27□□□□□ -1.73
UBC11YOR339C YCR023CP25351 611 aa4.26□□□□□ -1.73
UBC11YOR339C KRE9P39005 276 aa4.26□□□□□ -1.73
UBC11YOR339C YNL217WP40152 326 aa4.26□□□□□ -1.73
UBC11YOR339C YNL200CP40165 246 aaKnown RBP4.26□□□□□ -1.73
UBC11YOR339C HAL1Q01766 294 aa4.26□□□□□ -1.73
UBC11YOR339C RPL42AP0CX27 106 aaKnown RBP4.25□□□□□ -1.73
UBC11YOR339C RPL42BP0CX28 106 aaKnown RBP4.25□□□□□ -1.73
UBC11YOR339C RPS8AP0CX39 200 aaKnown RBP4.25□□□□□ -1.73
UBC11YOR339C RPS8BP0CX40 200 aaKnown RBP4.25□□□□□ -1.73
UBC11YOR339C SSS1P35179 80 aa4.25□□□□□ -1.73
UBC11YOR339C SEC72P39742 193 aaKnown RBP4.25□□□□□ -1.73
UBC11YOR339C YER134CP40081 178 aa4.25□□□□□ -1.73
UBC11YOR339C YIL014C-AQ02598 104 aa4.25□□□□□ -1.73
UBC11YOR339C MED7Q08278 222 aa4.25□□□□□ -1.73
UBC11YOR339C YPR014CQ6B0W2 109 aa4.25□□□□□ -1.73
UBC11YOR339C SAL1D6W196 494 aa4.24□□□□□ -1.73
UBC11YOR339C GSP1P32835 219 aaKnown RBP4.24□□□□□ -1.73
UBC11YOR339C GSP2P32836 220 aaKnown RBP4.24□□□□□ -1.73
UBC11YOR339C YPT53P36019 220 aa4.24□□□□□ -1.73
UBC11YOR339C TEM1P38987 245 aa4.24□□□□□ -1.73
UBC11YOR339C YER076CP40049 302 aa4.24□□□□□ -1.73
UBC11YOR339C DCV1P43595 202 aa4.24□□□□□ -1.73
UBC11YOR339C YGL118CP53132 145 aa4.24□□□□□ -1.73
UBC11YOR339C ATP23P53722 227 aa4.24□□□□□ -1.73
UBC11YOR339C DGA1Q08650 418 aa4.24□□□□□ -1.73
UBC11YOR339C YGR240C-AQ3E786 66 aa4.24□□□□□ -1.73
UBC11YOR339C PRE1P22141 198 aaKnown RBP4.23□□□□□ -1.73
UBC11YOR339C GLO1P50107 326 aa4.23□□□□□ -1.73
UBC11YOR339C CUE4Q04201 117 aaPredicted RBP4.23□□□□□ -1.73
UBC11YOR339C PFY1P07274 126 aa4.22□□□□□ -1.73
UBC11YOR339C CDC40P40968 455 aaPredicted RBP4.22□□□□□ -1.73
UBC11YOR339C MGR2Q02889 113 aa4.22□□□□□ -1.73
UBC11YOR339C SEN15Q04675 128 aa4.22□□□□□ -1.73
UBC11YOR339C CRC1Q12289 327 aa4.22□□□□□ -1.73
UBC11YOR339C CMC2Q3E7A4 109 aa4.22□□□□□ -1.73
UBC11YOR339C AQY1P0CD91 305 aa4.21□□□□□ -1.74
UBC11YOR339C YKR070WP36151 352 aaKnown RBP4.21□□□□□ -1.74
UBC11YOR339C YJL028WP47062 111 aa4.21□□□□□ -1.74
UBC11YOR339C OST3P48439 350 aa4.21□□□□□ -1.74
UBC11YOR339C PMP3P87284 55 aa4.21□□□□□ -1.74
UBC11YOR339C FCF1Q05498 189 aaPredicted RBP4.21□□□□□ -1.74
UBC11YOR339C ERG27Q12452 347 aaKnown RBP4.21□□□□□ -1.74
UBC11YOR339C UBC5P15732 148 aa4.2□□□□□ -1.74
UBC11YOR339C YIL134C-AQ45U18 67 aa4.2□□□□□ -1.74
UBC11YOR339C MDN1Q12019 4910 aaKnown RBP4.19□□□□□ -1.74
UBC11YOR339C PCL2P25693 308 aa4.19□□□□□ -1.74
UBC11YOR339C TOS6P48560 102 aa4.19□□□□□ -1.74
UBC11YOR339C POP3P53833 195 aaPredicted RBP4.19□□□□□ -1.74
UBC11YOR339C HTL1Q9URQ5 78 aa4.19□□□□□ -1.74
UBC11YOR339C RPL16AP26784 199 aaKnown RBP4.18□□□□□ -1.74
UBC11YOR339C MRPL11P36521 249 aaPredicted RBP4.18□□□□□ -1.74
UBC11YOR339C YBR209WP38311 105 aa4.18□□□□□ -1.74
UBC11YOR339C RPR2P40571 144 aa4.18□□□□□ -1.74
UBC11YOR339C YJR146WP47174 117 aa4.18□□□□□ -1.74
UBC11YOR339C YGL088WP53151 121 aa4.18□□□□□ -1.74
UBC11YOR339C ERV14P53173 138 aa4.18□□□□□ -1.74
UBC11YOR339C YDR042CQ03205 200 aa4.18□□□□□ -1.74
UBC11YOR339C DPP1Q05521 289 aa4.18□□□□□ -1.74
UBC11YOR339C YOR008C-AQ3E7B9 74 aa4.18□□□□□ -1.74
UBC11YOR339C HMRA2P0CY13 119 aa4.17□□□□□ -1.74
UBC11YOR339C ARC15P40518 154 aaRIP-Chip data4.17□□□□□ -1.74not detected
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms