RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YMR321CQ04898 105 aa3.08□□□□□ -1.92
ABP140YOR239W SHH4Q06236 168 aa3.08□□□□□ -1.92
ABP140YOR239W YMR175W-AQ3E766 64 aa3.08□□□□□ -1.92
ABP140YOR239W YLR302CO13544 120 aa3.07□□□□□ -1.92
ABP140YOR239W YMR317WQ04893 1140 aa3.07□□□□□ -1.92
ABP140YOR239W RXT3Q07458 294 aa3.07□□□□□ -1.92
ABP140YOR239W RLM1Q12224 676 aa3.07□□□□□ -1.92
ABP140YOR239W YHR173CP38864 112 aa3.07□□□□□ -1.92
ABP140YOR239W PAU7P39545 55 aa3.07□□□□□ -1.92
ABP140YOR239W RRT13P40042 185 aa3.07□□□□□ -1.92
ABP140YOR239W SGN1P40561 250 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
ABP140YOR239W MST27P53176 234 aa3.07□□□□□ -1.92
ABP140YOR239W AQY1P0CD91 305 aa3.06□□□□□ -1.92
ABP140YOR239W MRS3P10566 314 aa3.06□□□□□ -1.92
ABP140YOR239W MRPL31P14063 131 aaPredicted RBP3.06□□□□□ -1.92
ABP140YOR239W ROX3P25046 220 aa3.06□□□□□ -1.92
ABP140YOR239W YEL067CP39978 195 aa3.06□□□□□ -1.92
ABP140YOR239W YER079WP40052 210 aaKnown RBP3.06□□□□□ -1.92
ABP140YOR239W YNL217WP40152 326 aa3.06□□□□□ -1.92
ABP140YOR239W YNR077CP53758 84 aa3.06□□□□□ -1.92
ABP140YOR239W HSK3P69852 69 aa3.06□□□□□ -1.92
ABP140YOR239W RPS2P25443 254 aaKnown RBP3.05□□□□□ -1.92
ABP140YOR239W IES6P32617 166 aa3.05□□□□□ -1.92
ABP140YOR239W DSE2P38844 325 aa3.05□□□□□ -1.92
ABP140YOR239W YHR180WP38868 163 aa3.05□□□□□ -1.92
ABP140YOR239W YAR029WP39549 74 aa3.05□□□□□ -1.92
ABP140YOR239W YDR381C-AQ3E6R5 114 aa3.05□□□□□ -1.92
ABP140YOR239W TAO3P40468 2376 aa3.05□□□□□ -1.92
ABP140YOR239W RPL28P02406 149 aaKnown RBP3.05□□□□□ -1.92
ABP140YOR239W YKR073CP36153 106 aa3.05□□□□□ -1.92
ABP140YOR239W MBB1P39534 108 aa3.05□□□□□ -1.92
ABP140YOR239W PEX22P39718 180 aa3.05□□□□□ -1.92
ABP140YOR239W MIX14Q04341 121 aa3.05□□□□□ -1.92
ABP140YOR239W YLR281CQ05863 155 aa3.05□□□□□ -1.92
ABP140YOR239W GAT3Q07928 141 aa3.05□□□□□ -1.92
ABP140YOR239W RPL42AP0CX27 106 aaKnown RBP3.04□□□□□ -1.92
ABP140YOR239W RPL42BP0CX28 106 aaKnown RBP3.04□□□□□ -1.92
ABP140YOR239W RPS8AP0CX39 200 aaKnown RBP3.04□□□□□ -1.92
ABP140YOR239W RPS8BP0CX40 200 aaKnown RBP3.04□□□□□ -1.92
ABP140YOR239W UBC4P15731 148 aa3.04□□□□□ -1.92
ABP140YOR239W BET1P22804 142 aa3.04□□□□□ -1.92
ABP140YOR239W FPR2P32472 135 aa3.04□□□□□ -1.92
ABP140YOR239W PET8P38921 284 aa3.04□□□□□ -1.92
ABP140YOR239W YFL051CP43552 160 aa3.04□□□□□ -1.92
ABP140YOR239W TDA7P53882 636 aaPredicted RBP3.04□□□□□ -1.92
ABP140YOR239W HAL1Q01766 294 aa3.04□□□□□ -1.92
ABP140YOR239W YDR102CQ03864 110 aa3.04□□□□□ -1.92
ABP140YOR239W IRC23Q08416 157 aa3.04□□□□□ -1.92
ABP140YOR239W YPL261CQ08976 102 aa3.04□□□□□ -1.92
ABP140YOR239W YLR112WQ12130 139 aa3.04□□□□□ -1.92
ABP140YOR239W RPL18AP0CX49 186 aaKnown RBP3.03□□□□□ -1.92
ABP140YOR239W RPL18BP0CX50 186 aaKnown RBP3.03□□□□□ -1.92
ABP140YOR239W YRA2P36036 203 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
ABP140YOR239W SIM1P40472 476 aa3.03□□□□□ -1.92
ABP140YOR239W YIA6P40556 373 aa3.03□□□□□ -1.92
ABP140YOR239W RSM19P53733 91 aaPredicted RBP3.03□□□□□ -1.92
ABP140YOR239W PIR1Q03178 341 aa3.03□□□□□ -1.92
ABP140YOR239W YDR209CQ03480 137 aa3.03□□□□□ -1.92
ABP140YOR239W RPL20AP0CX23 172 aaKnown RBP3.03□□□□□ -1.93
ABP140YOR239W RPL20BP0CX24 172 aaPredicted RBP3.03□□□□□ -1.93
ABP140YOR239W HSP12P22943 109 aaKnown RBP3.03□□□□□ -1.93
ABP140YOR239W YER187WP40102 141 aa3.03□□□□□ -1.93
ABP140YOR239W SWS2P53937 143 aa3.03□□□□□ -1.93
ABP140YOR239W YNL046WP53956 172 aa3.03□□□□□ -1.93
ABP140YOR239W MOT3P54785 490 aaKnown RBP3.03□□□□□ -1.93
ABP140YOR239W API2Q04413 109 aa3.03□□□□□ -1.93
ABP140YOR239W PFY1P07274 126 aa3.02□□□□□ -1.93
ABP140YOR239W YDL022C-AP0C5L6 82 aa3.02□□□□□ -1.93
ABP140YOR239W RPL16BP26785 198 aaKnown RBP3.02□□□□□ -1.93
ABP140YOR239W RPL32P38061 130 aaKnown RBP3.02□□□□□ -1.93
ABP140YOR239W YSY6P38374 65 aa3.02□□□□□ -1.93
ABP140YOR239W OST1P41543 476 aaKnown RBP3.02□□□□□ -1.93
ABP140YOR239W YFR054CP43622 192 aa3.02□□□□□ -1.93
ABP140YOR239W NCA3P46955 337 aa3.02□□□□□ -1.93
ABP140YOR239W EMC6Q12431 108 aa3.02□□□□□ -1.93
ABP140YOR239W YDR034W-BQ6Q5X2 51 aa3.02□□□□□ -1.93
ABP140YOR239W IGO2Q9P305 131 aa3.02□□□□□ -1.93
ABP140YOR239W PCL2P25693 308 aa3.01□□□□□ -1.93
ABP140YOR239W YKR032WP36127 104 aa3.01□□□□□ -1.93
ABP140YOR239W SWD3P38123 315 aa3.01□□□□□ -1.93
ABP140YOR239W VEL1P53058 206 aa3.01□□□□□ -1.93
ABP140YOR239W TOM7P53507 60 aa3.01□□□□□ -1.93
ABP140YOR239W MGR2Q02889 113 aa3.01□□□□□ -1.93
ABP140YOR239W RRS1Q08746 203 aaKnown RBP3.01□□□□□ -1.93
ABP140YOR239W FIT2Q08906 153 aa3.01□□□□□ -1.93
ABP140YOR239W NIP7Q08962 181 aaKnown RBP3.01□□□□□ -1.93
ABP140YOR239W TIM22Q12328 207 aa3.01□□□□□ -1.93
ABP140YOR239W YOR343CQ12484 108 aa3.01□□□□□ -1.93
ABP140YOR239W VTC1P40046 129 aaRIP-Chip data3.01□□□□□ -1.93not detected
ABP140YOR239W HUA1P40325 198 aa3.01□□□□□ -1.93
ABP140YOR239W UBC13P52490 153 aa3.01□□□□□ -1.93
ABP140YOR239W YOL118CQ08259 102 aa3.01□□□□□ -1.93
ABP140YOR239W YOR387CQ08910 206 aa3.01□□□□□ -1.93
ABP140YOR239W AIM19P40502 157 aa3□□□□□ -1.93
ABP140YOR239W YBR126W-AQ8TGU7 68 aa3□□□□□ -1.93
ABP140YOR239W RPL30P14120 105 aaKnown RBP2.99□□□□□ -1.93
ABP140YOR239W YNL208WP40159 199 aaKnown RBP2.99□□□□□ -1.93
ABP140YOR239W GAT4P40569 121 aa2.99□□□□□ -1.93
ABP140YOR239W PBA1Q05778 276 aa2.99□□□□□ -1.93
ABP140YOR239W YOR192C-CQ3E736 78 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms