RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX27	YOR193W	YNL122C	P53921	115 aa	Predicted RBP	0.9	□□□□□ -2.27
PEX27	YOR193W	GPI11	Q06636	219 aa		0.9	□□□□□ -2.27
PEX27	YOR193W	MHF1	Q3E835	90 aa		0.9	□□□□□ -2.27
PEX27	YOR193W	KTI11	Q3E840	82 aa		0.9	□□□□□ -2.27
PEX27	YOR193W	SEC7	P11075	2009 aa	Known RBP	0.89	□□□□□ -2.27
PEX27	YOR193W	RTC6	O14464	93 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	EMP24	P32803	203 aa	Known RBP	0.89	□□□□□ -2.27
PEX27	YOR193W	ATG8	P38182	117 aa	RIP-Chip data	0.89	□□□□□ -2.27	not detected
PEX27	YOR193W	AIM4	P38305	123 aa	Predicted RBP	0.89	□□□□□ -2.27
PEX27	YOR193W	PAU12	P53343	120 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	ZEO1	Q08245	113 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	NAT5	Q08689	176 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	MED11	Q99278	115 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	LAA1	P39526	2014 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	DNA2	P38859	1522 aa		0.89	□□□□□ -2.27
PEX27	YOR193W	TY1B-PR2	P0C2J0	1756 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	KRE5	P22023	1365 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	RPS22A	P0C0W1	130 aa	Known RBP	0.88	□□□□□ -2.27
PEX27	YOR193W	HAP3	P13434	144 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YCR099C	P25657	155 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YEA6	P39953	335 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	GNA1	P43577	159 aa	Predicted RBP	0.88	□□□□□ -2.27
PEX27	YOR193W	MPC1	P53157	130 aa	Known RBP	0.88	□□□□□ -2.27
PEX27	YOR193W	YIL014C-A	Q02598	104 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	SEN15	Q04675	128 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YLR194C	Q05777	254 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	PRM3	Q08931	133 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.88	□□□□□ -2.27
PEX27	YOR193W	YRF1-1	P0CX20	1796 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YRF1-5	P0CX21	1796 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YRF1-8	P0CX22	1796 aa		0.88	□□□□□ -2.27
PEX27	YOR193W	YGL014C-A	P0C5N1	53 aa		0.87	□□□□□ -2.27
PEX27	YOR193W	BUD23	P25627	275 aa	Predicted RBP	0.87	□□□□□ -2.27
PEX27	YOR193W	PAU2	P32612	120 aa		0.87	□□□□□ -2.27
PEX27	YOR193W	AIM18	P38884	321 aa		0.87	□□□□□ -2.27
PEX27	YOR193W	YER187W	P40102	141 aa		0.87	□□□□□ -2.27
PEX27	YOR193W	YMR103C	Q04436	120 aa		0.87	□□□□□ -2.27
PEX27	YOR193W	YOR289W	Q12012	251 aa	Predicted RBP	0.87	□□□□□ -2.27
PEX27	YOR193W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.86	□□□□□ -2.27
PEX27	YOR193W	LYS2	P07702	1392 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	TY1B-BR	Q12193	1756 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	RPL33A	P05744	107 aa	Known RBP	0.86	□□□□□ -2.27
PEX27	YOR193W	UBC5	P15732	148 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	MRPL11	P36521	249 aa	Predicted RBP	0.86	□□□□□ -2.27
PEX27	YOR193W	PAU24	P38155	120 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	SED1	Q01589	338 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	MGR2	Q02889	113 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	YLR296W	Q05898	108 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	YPL261C	Q08976	102 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	YLR365W	Q7LIF2	110 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	YCL001W-B	Q96VH2	84 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	PDR10	P51533	1564 aa		0.86	□□□□□ -2.27
PEX27	YOR193W	MLP1	Q02455	1875 aa	Known RBP	0.86	□□□□□ -2.27
PEX27	YOR193W	ROM2	P51862	1356 aa	Known RBP	0.85	□□□□□ -2.27
PEX27	YOR193W	REV3	P14284	1504 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	HFA1	P32874	2273 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	PAU19	P0CE85	124 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	YHR213W	P0CI67	198 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	PAU3	P25610	124 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	YBR090C	P38253	122 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	YMR122C	Q03879	124 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	IRC21	Q04772	201 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	HPA2	Q06592	156 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	DAD1	Q12248	94 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	PCC1	Q3E833	88 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	OST5	Q92316	86 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	MIC10	Q96VH5	97 aa		0.85	□□□□□ -2.27
PEX27	YOR193W	GEA1	P47102	1408 aa	Predicted RBP	0.84	□□□□□ -2.27
PEX27	YOR193W	RPL36B	O14455	100 aa	Known RBP	0.84	□□□□□ -2.27
PEX27	YOR193W	RPL36A	P05745	100 aa	Predicted RBP	0.84	□□□□□ -2.27
PEX27	YOR193W	YJL197C-A	P0C5P0	93 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	HMRA2	P0CY13	119 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	SRX1	P36077	127 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	COX23	P38824	151 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	GTT1	P40582	234 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	LST8	P41318	303 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	YGR164W	P53291	111 aa		0.84	□□□□□ -2.27
PEX27	YOR193W	YMR090W	Q04304	227 aa	Known RBP	0.84	□□□□□ -2.27
PEX27	YOR193W	ECM29	P38737	1868 aa		0.84	□□□□□ -2.28
PEX27	YOR193W	SSN2	P38931	1420 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	PAU16	P35994	123 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	CYB5	P40312	120 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	PAU15	P40585	124 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	HUR1	P45820	110 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	SNN1	P48232	102 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	RSM19	P53733	91 aa	Predicted RBP	0.83	□□□□□ -2.28
PEX27	YOR193W	RPL22B	P56628	122 aa	Known RBP	0.83	□□□□□ -2.28
PEX27	YOR193W	COA4	Q05809	96 aa		0.83	□□□□□ -2.28
PEX27	YOR193W	GEA2	P39993	1459 aa	Known RBP	0.83	□□□□□ -2.28
PEX27	YOR193W	CAT8	P39113	1433 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	UBC4	P15731	148 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	YIL163C	P40448	117 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	YIR020C	P40575	100 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	YJL009W	P47078	108 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	YLR285C-A	Q3E771	56 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	KSH1	Q8TGJ3	72 aa		0.82	□□□□□ -2.28
PEX27	YOR193W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.81	□□□□□ -2.28
PEX27	YOR193W	SWR1	Q05471	1514 aa		0.81	□□□□□ -2.28
PEX27	YOR193W	RPL22A	P05749	121 aa	Known RBP	0.81	□□□□□ -2.28
PEX27	YOR193W	YSF3	P0C074	85 aa	Predicted RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 99.9 ms