RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W LSM8P47093 109 aaKnown RBP2.2□□□□□ -2.06
MSH2YOL090W MED11Q99278 115 aa2.2□□□□□ -2.06
MSH2YOL090W SCM4P32564 187 aa2.2□□□□□ -2.06
MSH2YOL090W YKL044WP36092 106 aa2.2□□□□□ -2.06
MSH2YOL090W CCS1P40202 249 aaKnown RBP2.2□□□□□ -2.06
MSH2YOL090W YPR174CQ06616 221 aaPredicted RBP2.2□□□□□ -2.06
MSH2YOL090W TOR1P35169 2470 aa2.19□□□□□ -2.06
MSH2YOL090W YLR236CA0A023PZG4 107 aa2.19□□□□□ -2.06
MSH2YOL090W HAP3P13434 144 aa2.19□□□□□ -2.06
MSH2YOL090W FPR1P20081 114 aaKnown RBP2.19□□□□□ -2.06
MSH2YOL090W UTH1P36135 365 aa2.19□□□□□ -2.06
MSH2YOL090W SPG1P50088 95 aa2.19□□□□□ -2.06
MSH2YOL090W ERG25P53045 309 aa2.19□□□□□ -2.06
MSH2YOL090W ATG41Q12048 136 aa2.19□□□□□ -2.06
MSH2YOL090W LAA1P39526 2014 aa2.19□□□□□ -2.06
MSH2YOL090W YEL067CP39978 195 aa2.19□□□□□ -2.06
MSH2YOL090W THG1P53215 237 aaKnown RBP2.19□□□□□ -2.06
MSH2YOL090W IRC19Q07843 230 aa2.19□□□□□ -2.06
MSH2YOL090W GTT2Q12390 233 aa2.19□□□□□ -2.06
MSH2YOL090W ATG40Q99325 256 aa2.19□□□□□ -2.06
MSH2YOL090W TMA19P35691 167 aaKnown RBP2.18□□□□□ -2.06
MSH2YOL090W SNF11P38956 169 aa2.18□□□□□ -2.06
MSH2YOL090W TIR3P40552 269 aa2.18□□□□□ -2.06
MSH2YOL090W RPL33BP41056 107 aaKnown RBP2.18□□□□□ -2.06
MSH2YOL090W YFR035CP43608 114 aa2.18□□□□□ -2.06
MSH2YOL090W KNH1P50112 268 aa2.18□□□□□ -2.06
MSH2YOL090W NHP10Q03435 203 aa2.18□□□□□ -2.06
MSH2YOL090W UPS3Q04006 179 aa2.18□□□□□ -2.06
MSH2YOL090W FAB1P34756 2278 aa2.18□□□□□ -2.06
MSH2YOL090W YEL045CP32616 141 aa2.18□□□□□ -2.06
MSH2YOL090W SOM1Q05676 74 aa2.18□□□□□ -2.06
MSH2YOL090W YPR195CQ06594 109 aa2.18□□□□□ -2.06
MSH2YOL090W YPR013CQ12145 317 aa2.18□□□□□ -2.06
MSH2YOL090W FYV5P25585 152 aa2.17□□□□□ -2.06
MSH2YOL090W YFL012WP43580 148 aa2.17□□□□□ -2.06
MSH2YOL090W YJR146WP47174 117 aa2.17□□□□□ -2.06
MSH2YOL090W PIR1Q03178 341 aa2.17□□□□□ -2.06
MSH2YOL090W YHP1Q04116 353 aa2.17□□□□□ -2.06
MSH2YOL090W YCR099CP25657 155 aa2.17□□□□□ -2.06
MSH2YOL090W KEI1Q06346 221 aa2.17□□□□□ -2.06
MSH2YOL090W UIP4Q08926 304 aa2.17□□□□□ -2.06
MSH2YOL090W EMP24P32803 203 aaKnown RBP2.16□□□□□ -2.06
MSH2YOL090W NUM1Q00402 2748 aa2.16□□□□□ -2.06
MSH2YOL090W YGL041W-AP0C5N3 154 aa2.16□□□□□ -2.06
MSH2YOL090W QCR10P37299 77 aa2.16□□□□□ -2.06
MSH2YOL090W UTR5P32630 166 aa2.16□□□□□ -2.06
MSH2YOL090W RPL26AP05743 127 aaKnown RBP2.15□□□□□ -2.07
MSH2YOL090W CLB6P32943 380 aa2.15□□□□□ -2.07
MSH2YOL090W SPO73P40031 143 aa2.15□□□□□ -2.07
MSH2YOL090W RPL26BP53221 127 aaKnown RBP2.15□□□□□ -2.07
MSH2YOL090W YHL018WP38744 120 aaPredicted RBP2.15□□□□□ -2.07
MSH2YOL090W YHR130CP38834 111 aa2.15□□□□□ -2.07
MSH2YOL090W SNU13P39990 126 aaKnown RBP2.15□□□□□ -2.07
MSH2YOL090W TDA2P40045 126 aa2.15□□□□□ -2.07
MSH2YOL090W YGR164WP53291 111 aa2.15□□□□□ -2.07
MSH2YOL090W RAD28Q12021 506 aa2.15□□□□□ -2.07
MSH2YOL090W PEX4P29340 183 aa2.14□□□□□ -2.07
MSH2YOL090W GPI19Q04082 140 aa2.14□□□□□ -2.07
MSH2YOL090W YGR269WP40326 108 aa2.14□□□□□ -2.07
MSH2YOL090W YIL059CP40520 121 aa2.14□□□□□ -2.07
MSH2YOL090W CIS3P47001 227 aa2.14□□□□□ -2.07
MSH2YOL090W ERV14P53173 138 aa2.14□□□□□ -2.07
MSH2YOL090W DAD4P69851 72 aa2.14□□□□□ -2.07
MSH2YOL090W YLR365WQ7LIF2 110 aa2.14□□□□□ -2.07
MSH2YOL090W MIC10Q96VH5 97 aa2.14□□□□□ -2.07
MSH2YOL090W RPL43AP0CX25 92 aaKnown RBP2.13□□□□□ -2.07
MSH2YOL090W RPL43BP0CX26 92 aa2.13□□□□□ -2.07
MSH2YOL090W SEC11P15367 167 aa2.13□□□□□ -2.07
MSH2YOL090W KRE1P17260 313 aa2.13□□□□□ -2.07
MSH2YOL090W AGA2P32781 87 aa2.13□□□□□ -2.07
MSH2YOL090W ATP19P81451 68 aa2.13□□□□□ -2.07
MSH2YOL090W CMC4Q3E7A9 73 aa2.13□□□□□ -2.07
MSH2YOL090W COX8P04039 78 aa2.13□□□□□ -2.07
MSH2YOL090W POP3P53833 195 aaPredicted RBP2.13□□□□□ -2.07
MSH2YOL090W YML079WQ03629 201 aa2.13□□□□□ -2.07
MSH2YOL090W KSH1Q8TGJ3 72 aa2.13□□□□□ -2.07
MSH2YOL090W PRE1P22141 198 aaKnown RBP2.12□□□□□ -2.07
MSH2YOL090W PAU12P53343 120 aa2.12□□□□□ -2.07
MSH2YOL090W ELP6Q04868 273 aa2.12□□□□□ -2.07
MSH2YOL090W NMA1Q06178 401 aaKnown RBP2.12□□□□□ -2.07
MSH2YOL090W FIT2Q08906 153 aa2.12□□□□□ -2.07
MSH2YOL090W CUE4Q04201 117 aaPredicted RBP2.12□□□□□ -2.07
MSH2YOL090W YMR090WQ04304 227 aaKnown RBP2.12□□□□□ -2.07
MSH2YOL090W UBC4P15731 148 aa2.11□□□□□ -2.07
MSH2YOL090W MRPS9P38120 278 aa2.11□□□□□ -2.07
MSH2YOL090W YBR209WP38311 105 aa2.11□□□□□ -2.07
MSH2YOL090W RAF1Q06891 181 aa2.11□□□□□ -2.07
MSH2YOL090W VPS68Q12016 184 aa2.11□□□□□ -2.07
MSH2YOL090W RDS3Q06835 107 aaPredicted RBP2.11□□□□□ -2.07
MSH2YOL090W PAU21P0CE86 164 aa2.1□□□□□ -2.07
MSH2YOL090W PAU22P0CE87 164 aa2.1□□□□□ -2.07
MSH2YOL090W YGL010WP25338 174 aa2.1□□□□□ -2.07
MSH2YOL090W GTT1P40582 234 aa2.1□□□□□ -2.07
MSH2YOL090W SEN15Q04675 128 aa2.1□□□□□ -2.07
MSH2YOL090W VPS13Q07878 3144 aa2.1□□□□□ -2.07
MSH2YOL090W HPA3P39979 161 aa2.1□□□□□ -2.07
MSH2YOL090W DCV1P43595 202 aa2.1□□□□□ -2.07
MSH2YOL090W YGL149WP53116 101 aa2.1□□□□□ -2.07
MSH2YOL090W MPC1P53157 130 aaKnown RBP2.1□□□□□ -2.07
MSH2YOL090W PAU2P32612 120 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 123.6 ms