RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W YHR180WP38868 163 aa2.44□□□□□ -2.02
CPR8YNR028W YGL149WP53116 101 aa2.44□□□□□ -2.02
CPR8YNR028W EMC6Q12431 108 aa2.44□□□□□ -2.02
CPR8YNR028W NUP159P40477 1460 aa2.44□□□□□ -2.02
CPR8YNR028W RPA12P32529 125 aaKnown RBP2.43□□□□□ -2.02
CPR8YNR028W SWM2P40342 146 aa2.43□□□□□ -2.02
CPR8YNR028W SMD3P43321 101 aaKnown RBP2.43□□□□□ -2.02
CPR8YNR028W DAD4P69851 72 aa2.43□□□□□ -2.02
CPR8YNR028W OST5Q92316 86 aa2.43□□□□□ -2.02
CPR8YNR028W RPL36BO14455 100 aaKnown RBP2.42□□□□□ -2.02
CPR8YNR028W RPL36AP05745 100 aaPredicted RBP2.42□□□□□ -2.02
CPR8YNR028W YCR085WP25650 117 aa2.42□□□□□ -2.02
CPR8YNR028W YHL005CP38752 130 aa2.42□□□□□ -2.02
CPR8YNR028W SVP26P38869 228 aa2.42□□□□□ -2.02
CPR8YNR028W YEL067CP39978 195 aa2.42□□□□□ -2.02
CPR8YNR028W RPL22BP56628 122 aaKnown RBP2.42□□□□□ -2.02
CPR8YNR028W TY1B-DR4Q07793 1604 aa2.42□□□□□ -2.02
CPR8YNR028W XRN1P22147 1528 aaKnown RBP2.42□□□□□ -2.02
CPR8YNR028W DNA2P38859 1522 aa2.42□□□□□ -2.02
CPR8YNR028W SCC2Q04002 1493 aa2.41□□□□□ -2.02
CPR8YNR028W RPL26AP05743 127 aaKnown RBP2.41□□□□□ -2.02
CPR8YNR028W SEC11P15367 167 aa2.41□□□□□ -2.02
CPR8YNR028W STF2P16965 84 aa2.41□□□□□ -2.02
CPR8YNR028W YKR045CP36138 183 aa2.41□□□□□ -2.02
CPR8YNR028W HYR1P40581 163 aaKnown RBP2.41□□□□□ -2.02
CPR8YNR028W DCV1P43595 202 aa2.41□□□□□ -2.02
CPR8YNR028W BOL2P53082 120 aa2.41□□□□□ -2.02
CPR8YNR028W RPL26BP53221 127 aaKnown RBP2.41□□□□□ -2.02
CPR8YNR028W YNR077CP53758 84 aa2.41□□□□□ -2.02
CPR8YNR028W YIL014C-AQ02598 104 aa2.41□□□□□ -2.02
CPR8YNR028W YDL241WQ07738 123 aa2.41□□□□□ -2.02
CPR8YNR028W ENV10Q99382 181 aa2.41□□□□□ -2.02
CPR8YNR028W YLR422WQ06409 1932 aa2.4□□□□□ -2.02
CPR8YNR028W YPK9Q12697 1472 aa2.4□□□□□ -2.02
CPR8YNR028W FUN14P18411 198 aa2.4□□□□□ -2.03
CPR8YNR028W TOM6P33448 61 aa2.4□□□□□ -2.03
CPR8YNR028W RSM18P40033 138 aa2.4□□□□□ -2.03
CPR8YNR028W CWP2P43497 92 aa2.4□□□□□ -2.03
CPR8YNR028W YFL065CP43539 102 aa2.4□□□□□ -2.03
CPR8YNR028W SNN1P48232 102 aa2.4□□□□□ -2.03
CPR8YNR028W BRP1P53194 125 aa2.4□□□□□ -2.03
CPR8YNR028W POP3P53833 195 aaPredicted RBP2.4□□□□□ -2.03
CPR8YNR028W YDR042CQ03205 200 aa2.4□□□□□ -2.03
CPR8YNR028W SEN15Q04675 128 aa2.4□□□□□ -2.03
CPR8YNR028W COA4Q05809 96 aa2.4□□□□□ -2.03
CPR8YNR028W HPA2Q06592 156 aa2.4□□□□□ -2.03
CPR8YNR028W RDS3Q06835 107 aaPredicted RBP2.4□□□□□ -2.03
CPR8YNR028W YPR203WQ08994 102 aa2.4□□□□□ -2.03
CPR8YNR028W SRB8P25648 1427 aa2.4□□□□□ -2.03
CPR8YNR028W MLP1Q02455 1875 aaKnown RBP2.39□□□□□ -2.03
CPR8YNR028W SIN3P22579 1536 aa2.39□□□□□ -2.03
CPR8YNR028W ATG8P38182 117 aaRIP-Chip data2.39□□□□□ -2.03not detected
CPR8YNR028W MHF2Q3E829 80 aa2.39□□□□□ -2.03
CPR8YNR028W PCC1Q3E833 88 aa2.39□□□□□ -2.03
CPR8YNR028W MYO1P08964 1928 aa2.38□□□□□ -2.03
CPR8YNR028W COX8P04039 78 aa2.38□□□□□ -2.03
CPR8YNR028W GSC2P40989 1895 aa2.38□□□□□ -2.03
CPR8YNR028W SML1Q04964 104 aa2.38□□□□□ -2.03
CPR8YNR028W MMS22Q06164 1454 aa2.38□□□□□ -2.03
CPR8YNR028W YJL197C-AP0C5P0 93 aa2.37□□□□□ -2.03
CPR8YNR028W SRX1P36077 127 aa2.37□□□□□ -2.03
CPR8YNR028W YEL014CP39999 101 aa2.37□□□□□ -2.03
CPR8YNR028W YFL051CP43552 160 aa2.37□□□□□ -2.03
CPR8YNR028W YHR007C-AQ07074 71 aa2.37□□□□□ -2.03
CPR8YNR028W VPS68Q12016 184 aa2.37□□□□□ -2.03
CPR8YNR028W MHF1Q3E835 90 aa2.37□□□□□ -2.03
CPR8YNR028W POL1P13382 1468 aa2.37□□□□□ -2.03
CPR8YNR028W SEC7P11075 2009 aaKnown RBP2.37□□□□□ -2.03
CPR8YNR028W TCB3Q03640 1545 aaKnown RBP2.37□□□□□ -2.03
CPR8YNR028W GDB1Q06625 1536 aa2.37□□□□□ -2.03
CPR8YNR028W BPT1P14772 1559 aa2.36□□□□□ -2.03
CPR8YNR028W YLR419WQ06698 1435 aaKnown RBP2.36□□□□□ -2.03
CPR8YNR028W MON2P48563 1636 aaPredicted RBP2.36□□□□□ -2.03
CPR8YNR028W PAU19P0CE85 124 aa2.36□□□□□ -2.03
CPR8YNR028W PAU3P25610 124 aa2.36□□□□□ -2.03
CPR8YNR028W MRP17P28778 131 aa2.36□□□□□ -2.03
CPR8YNR028W PAU2P32612 120 aa2.36□□□□□ -2.03
CPR8YNR028W SSS1P35179 80 aa2.36□□□□□ -2.03
CPR8YNR028W YOL118CQ08259 102 aa2.36□□□□□ -2.03
CPR8YNR028W RTC6O14464 93 aa2.35□□□□□ -2.03
CPR8YNR028W PFY1P07274 126 aa2.35□□□□□ -2.03
CPR8YNR028W RPB7P34087 171 aa2.35□□□□□ -2.03
CPR8YNR028W ATX1P38636 73 aa2.35□□□□□ -2.03
CPR8YNR028W PAU12P53343 120 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-DR5P0C2I2 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-DR6P0C2I3 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-LR2P0C2I5 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-LR3P0C2I6 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-PR1P0C2I9 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-PR3P0C2J1 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-JR1P47098 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-ML2Q03434 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-ER1Q03612 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-ML1Q04711 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-GR2Q12269 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-OLQ12273 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-GR3Q12316 1755 aa2.35□□□□□ -2.03
CPR8YNR028W TY1B-PLQ12414 1755 aaKnown RBP2.35□□□□□ -2.03
CPR8YNR028W TY1B-ORQ92393 1755 aa2.35□□□□□ -2.03
CPR8YNR028W DOP1Q03921 1698 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms