RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeast

Gene KSH1, Length 219 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KSH1	YNL024C-A	DIA1	P54005	336 aa		5.03	□□□□□ -1.6
KSH1	YNL024C-A	UTR5	P32630	166 aa		5.02	□□□□□ -1.61
KSH1	YNL024C-A	YHR022C	P38763	256 aa		5.02	□□□□□ -1.61
KSH1	YNL024C-A	MST27	P53176	234 aa		5.02	□□□□□ -1.61
KSH1	YNL024C-A	FYV4	P38783	130 aa	Predicted RBP	5.01	□□□□□ -1.61
KSH1	YNL024C-A	KEG1	P43614	200 aa		5.01	□□□□□ -1.61
KSH1	YNL024C-A	YMR181C	Q03231	154 aa		5.01	□□□□□ -1.61
KSH1	YNL024C-A	VAR1	P02381	398 aa		5	□□□□□ -1.61
KSH1	YNL024C-A	YCR041W	P37265	110 aa		5	□□□□□ -1.61
KSH1	YNL024C-A	YDR366C	P87287	132 aa		5	□□□□□ -1.61
KSH1	YNL024C-A	SAE3	P89114	91 aa		5	□□□□□ -1.61
KSH1	YNL024C-A	MGR2	Q02889	113 aa		5	□□□□□ -1.61
KSH1	YNL024C-A	TPT1	Q12272	230 aa	Known RBP	5	□□□□□ -1.61
KSH1	YNL024C-A	RPL27B	P0C2H7	136 aa	Known RBP	4.99	□□□□□ -1.61
KSH1	YNL024C-A	AGA1	P32323	725 aa		4.99	□□□□□ -1.61
KSH1	YNL024C-A	YNL200C	P40165	246 aa	Known RBP	4.99	□□□□□ -1.61
KSH1	YNL024C-A	YJL028W	P47062	111 aa		4.99	□□□□□ -1.61
KSH1	YNL024C-A	YDR042C	Q03205	200 aa		4.99	□□□□□ -1.61
KSH1	YNL024C-A	YPR013C	Q12145	317 aa		4.99	□□□□□ -1.61
KSH1	YNL024C-A	PFY1	P07274	126 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	RPL42A	P0CX27	106 aa	Known RBP	4.98	□□□□□ -1.61
KSH1	YNL024C-A	RPL42B	P0CX28	106 aa	Known RBP	4.98	□□□□□ -1.61
KSH1	YNL024C-A	MPC2	P38857	129 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	HAC1	P41546	238 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	YCH1	P42937	148 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	ALG13	P53178	202 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	CAX4	P53223	239 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	POP3	P53833	195 aa	Predicted RBP	4.98	□□□□□ -1.61
KSH1	YNL024C-A	GRH1	Q04410	372 aa	Known RBP	4.98	□□□□□ -1.61
KSH1	YNL024C-A	TVP18	Q04767	167 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	DPP1	Q05521	289 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	MSA1	Q08471	629 aa		4.98	□□□□□ -1.61
KSH1	YNL024C-A	YCR023C	P25351	611 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	TOS6	P48560	102 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	YGL230C	P53074	147 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	MRPS8	Q03799	155 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	FCF1	Q05498	189 aa	Predicted RBP	4.97	□□□□□ -1.61
KSH1	YNL024C-A	PAU23	Q07987	124 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	PAU17	Q12370	124 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	PRM7	Q12459	698 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	YBR200W-A	Q3E755	54 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	YOR011W-A	Q3E807	68 aa		4.97	□□□□□ -1.61
KSH1	YNL024C-A	YBR144C	P34215	104 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	APS1	P35181	156 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YKR032W	P36127	104 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	MST28	P39552	234 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YER135C	P40082	130 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	FIP1	P45976	327 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YGR017W	P53210	297 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YIL014C-A	Q02598	104 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YMR244W	Q04018	355 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YDL157C	Q12082	118 aa		4.96	□□□□□ -1.62
KSH1	YNL024C-A	YHR212W-A	P0CX91	67 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	SEC11	P15367	167 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	KTI12	P34253	313 aa	Known RBP	4.95	□□□□□ -1.62
KSH1	YNL024C-A	YKL044W	P36092	106 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	YER076C	P40049	302 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	GLC8	P41818	229 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	YDL186W	P48568	277 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	NAT5	Q08689	176 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	YGR035W-A	Q45U48	73 aa		4.95	□□□□□ -1.62
KSH1	YNL024C-A	SAL1	D6W196	494 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	RPL31A	P0C2H8	113 aa	Known RBP	4.94	□□□□□ -1.62
KSH1	YNL024C-A	YKR070W	P36151	352 aa	Known RBP	4.94	□□□□□ -1.62
KSH1	YNL024C-A	PET8	P38921	284 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	MSL1	P40567	111 aa	Predicted RBP	4.94	□□□□□ -1.62
KSH1	YNL024C-A	MIC26	P50087	233 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	YGR025W	P53216	100 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	CWC27	Q02770	301 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	BET5	Q03630	159 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	AIM34	Q03673	198 aa		4.94	□□□□□ -1.62
KSH1	YNL024C-A	AQY1	P0CD91	305 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	RPL2A	P0CX45	254 aa	Known RBP	4.93	□□□□□ -1.62
KSH1	YNL024C-A	RPL2B	P0CX46	254 aa	Known RBP	4.93	□□□□□ -1.62
KSH1	YNL024C-A	MIG3	P39943	394 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	SIM1	P40472	476 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	ATP23	P53722	227 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	VPS71	Q03433	280 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	YPR014C	Q6B0W2	109 aa		4.93	□□□□□ -1.62
KSH1	YNL024C-A	Q0255	P03881	472 aa		4.92	□□□□□ -1.62
KSH1	YNL024C-A	RPS11A	P0CX47	156 aa	Known RBP	4.92	□□□□□ -1.62
KSH1	YNL024C-A	RPS11B	P0CX48	156 aa	Known RBP	4.92	□□□□□ -1.62
KSH1	YNL024C-A	HAP3	P13434	144 aa		4.92	□□□□□ -1.62
KSH1	YNL024C-A	PCL2	P25693	308 aa		4.92	□□□□□ -1.62
KSH1	YNL024C-A	TAR1	Q8TGM6	124 aa		4.92	□□□□□ -1.62
KSH1	YNL024C-A	YBR126W-A	Q8TGU7	68 aa		4.92	□□□□□ -1.62
KSH1	YNL024C-A	RPL16B	P26785	198 aa	Known RBP	4.91	□□□□□ -1.62
KSH1	YNL024C-A	ECM33	P38248	429 aa	Known RBP	4.91	□□□□□ -1.62
KSH1	YNL024C-A	URM1	P40554	99 aa	Predicted RBP	4.91	□□□□□ -1.62
KSH1	YNL024C-A	GLO1	P50107	326 aa		4.91	□□□□□ -1.62
KSH1	YNL024C-A	YML079W	Q03629	201 aa		4.91	□□□□□ -1.62
KSH1	YNL024C-A	YMR103C	Q04436	120 aa		4.91	□□□□□ -1.62
KSH1	YNL024C-A	YOR008C-A	Q3E7B9	74 aa		4.91	□□□□□ -1.62
KSH1	YNL024C-A	DCV1	P43595	202 aa		4.9	□□□□□ -1.63
KSH1	YNL024C-A	YDR274C	P87283	123 aa		4.9	□□□□□ -1.63
KSH1	YNL024C-A	PKR1	Q03880	122 aa	Known RBP	4.9	□□□□□ -1.63
KSH1	YNL024C-A	YLR112W	Q12130	139 aa		4.9	□□□□□ -1.63
KSH1	YNL024C-A	YOL085C	Q99345	113 aa		4.9	□□□□□ -1.63
KSH1	YNL024C-A	VHS2	P40463	436 aa		4.89	□□□□□ -1.63
KSH1	YNL024C-A	YCR075W-A	Q3E830	75 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms