RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W YBR242WP38331 238 aa1.69□□□□□ -2.14
TAF4YMR005W PAM16P42949 149 aa1.69□□□□□ -2.14
TAF4YMR005W GAL83Q04739 417 aa1.69□□□□□ -2.14
TAF4YMR005W NMA1Q06178 401 aaKnown RBP1.69□□□□□ -2.14
TAF4YMR005W TAR1Q8TGM6 124 aa1.69□□□□□ -2.14
TAF4YMR005W YMR105W-AQ8TGS8 64 aa1.69□□□□□ -2.14
TAF4YMR005W NSE4P43124 402 aa1.68□□□□□ -2.14
TAF4YMR005W CCC1P47818 322 aa1.68□□□□□ -2.14
TAF4YMR005W YPL067CQ02754 198 aa1.68□□□□□ -2.14
TAF4YMR005W SNO1Q03144 224 aa1.68□□□□□ -2.14
TAF4YMR005W YHP1Q04116 353 aa1.68□□□□□ -2.14
TAF4YMR005W UPS1Q05776 175 aa1.68□□□□□ -2.14
TAF4YMR005W RFU1Q08003 200 aa1.68□□□□□ -2.14
TAF4YMR005W LCL2Q08045 131 aa1.68□□□□□ -2.14
TAF4YMR005W YPR203WQ08994 102 aa1.68□□□□□ -2.14
TAF4YMR005W FCY1Q12178 158 aa1.68□□□□□ -2.14
TAF4YMR005W YGR035W-AQ45U48 73 aa1.68□□□□□ -2.14
TAF4YMR005W ADK1P07170 222 aaKnown RBP1.67□□□□□ -2.14
TAF4YMR005W VMA10P48836 114 aaKnown RBP1.67□□□□□ -2.14
TAF4YMR005W HUT1Q12520 339 aa1.67□□□□□ -2.14
TAF4YMR005W YLR099W-AQ3E798 87 aa1.67□□□□□ -2.14
TAF4YMR005W AHT1P29589 182 aa1.66□□□□□ -2.14
TAF4YMR005W PAU24P38155 120 aa1.66□□□□□ -2.14
TAF4YMR005W FIG1P38224 298 aa1.66□□□□□ -2.14
TAF4YMR005W EGD2P38879 174 aaKnown RBP1.66□□□□□ -2.14
TAF4YMR005W XPT1P47165 209 aa1.66□□□□□ -2.14
TAF4YMR005W TTI2P47168 421 aa1.66□□□□□ -2.14
TAF4YMR005W PAU12P53343 120 aa1.66□□□□□ -2.14
TAF4YMR005W HHT1P61830 136 aa1.66□□□□□ -2.14
TAF4YMR005W HSK3P69852 69 aa1.66□□□□□ -2.14
TAF4YMR005W MAK3Q03503 176 aa1.66□□□□□ -2.14
TAF4YMR005W YOR192C-CQ3E736 78 aa1.66□□□□□ -2.14
TAF4YMR005W YOS1Q3E834 85 aa1.66□□□□□ -2.14
TAF4YMR005W YKR041WP36134 250 aa1.65□□□□□ -2.15
TAF4YMR005W NVJ1P38881 321 aa1.65□□□□□ -2.15
TAF4YMR005W RFC2P40348 353 aa1.65□□□□□ -2.15
TAF4YMR005W GNA1P43577 159 aaPredicted RBP1.65□□□□□ -2.15
TAF4YMR005W YGL204CP53089 101 aa1.65□□□□□ -2.15
TAF4YMR005W TLG1Q03322 224 aa1.65□□□□□ -2.15
TAF4YMR005W FIT1Q04433 528 aa1.65□□□□□ -2.15
TAF4YMR005W ATG41Q12048 136 aa1.65□□□□□ -2.15
TAF4YMR005W BUD23P25627 275 aaPredicted RBP1.64□□□□□ -2.15
TAF4YMR005W PAU2P32612 120 aa1.64□□□□□ -2.15
TAF4YMR005W FIP1P45976 327 aa1.64□□□□□ -2.15
TAF4YMR005W YGR042WP53227 271 aa1.64□□□□□ -2.15
TAF4YMR005W VPS28Q02767 242 aa1.64□□□□□ -2.15
TAF4YMR005W YOL118CQ08259 102 aa1.64□□□□□ -2.15
TAF4YMR005W COX9P07255 59 aa1.63□□□□□ -2.15
TAF4YMR005W MRS4P23500 304 aa1.63□□□□□ -2.15
TAF4YMR005W YCR101CP25607 182 aa1.63□□□□□ -2.15
TAF4YMR005W SUA7P29055 345 aaPredicted RBP1.63□□□□□ -2.15
TAF4YMR005W YPD1Q07688 167 aa1.63□□□□□ -2.15
TAF4YMR005W MED11Q99278 115 aa1.63□□□□□ -2.15
TAF4YMR005W YRA2P36036 203 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
TAF4YMR005W CCS1P40202 249 aaKnown RBP1.62□□□□□ -2.15
TAF4YMR005W VPS55P47111 140 aa1.62□□□□□ -2.15
TAF4YMR005W SOL1P50278 321 aa1.62□□□□□ -2.15
TAF4YMR005W HOR7Q05827 59 aa1.62□□□□□ -2.15
TAF4YMR005W CPR5P35176 225 aa1.61□□□□□ -2.15
TAF4YMR005W MRPL38P35996 138 aaPredicted RBP1.61□□□□□ -2.15
TAF4YMR005W ECM31P38122 312 aa1.61□□□□□ -2.15
TAF4YMR005W FYV4P38783 130 aaPredicted RBP1.61□□□□□ -2.15
TAF4YMR005W GIM3P53900 129 aa1.61□□□□□ -2.15
TAF4YMR005W YOR381W-AQ3E804 55 aa1.61□□□□□ -2.15
TAF4YMR005W PET54P10834 293 aa1.6□□□□□ -2.15
TAF4YMR005W TRR1P29509 319 aaKnown RBP1.6□□□□□ -2.15
TAF4YMR005W YPT31P38555 223 aaKnown RBP1.6□□□□□ -2.15
TAF4YMR005W YJL218WP40892 196 aaKnown RBP1.6□□□□□ -2.15
TAF4YMR005W RBL2P48606 106 aaKnown RBP1.6□□□□□ -2.15
TAF4YMR005W TMA20P89886 181 aaPredicted RBP1.6□□□□□ -2.15
TAF4YMR005W PRM3Q08931 133 aa1.6□□□□□ -2.15
TAF4YMR005W HUG1Q6Q5K6 68 aa1.6□□□□□ -2.15
TAF4YMR005W SUS1Q6WNK7 96 aa1.6□□□□□ -2.15
TAF4YMR005W ROX3P25046 220 aa1.59□□□□□ -2.15
TAF4YMR005W HTD2P38790 280 aaKnown RBP1.59□□□□□ -2.15
TAF4YMR005W YHR138CP38841 114 aaPredicted RBP1.59□□□□□ -2.15
TAF4YMR005W YNL200CP40165 246 aaKnown RBP1.59□□□□□ -2.15
TAF4YMR005W YPR108W-AQ3E7B3 70 aa1.59□□□□□ -2.15
TAF4YMR005W YLR365WQ7LIF2 110 aa1.59□□□□□ -2.15
TAF4YMR005W HYM1P32464 399 aa1.58□□□□□ -2.16
TAF4YMR005W SNU13P39990 126 aaKnown RBP1.58□□□□□ -2.16
TAF4YMR005W POG1P40473 351 aa1.58□□□□□ -2.16
TAF4YMR005W KEI1Q06346 221 aa1.58□□□□□ -2.16
TAF4YMR005W RDI1Q12434 202 aa1.58□□□□□ -2.16
TAF4YMR005W PET20Q99373 253 aa1.58□□□□□ -2.16
TAF4YMR005W YER137CP40083 148 aaKnown RBP1.57□□□□□ -2.16
TAF4YMR005W LST8P41318 303 aa1.57□□□□□ -2.16
TAF4YMR005W DIE2P50076 525 aa1.57□□□□□ -2.16
TAF4YMR005W JAC1P53193 184 aa1.57□□□□□ -2.16
TAF4YMR005W DYN2Q02647 92 aa1.57□□□□□ -2.16
TAF4YMR005W THI74Q04083 370 aa1.57□□□□□ -2.16
TAF4YMR005W HRD1Q08109 551 aa1.57□□□□□ -2.16
TAF4YMR005W SCP1Q08873 200 aa1.57□□□□□ -2.16
TAF4YMR005W AUA1P32450 94 aa1.56□□□□□ -2.16
TAF4YMR005W UGX2P32772 223 aa1.56□□□□□ -2.16
TAF4YMR005W MPC2P38857 129 aa1.56□□□□□ -2.16
TAF4YMR005W YOR011W-AQ3E807 68 aa1.56□□□□□ -2.16
TAF4YMR005W IPI1P38803 334 aaPredicted RBP1.55□□□□□ -2.16
TAF4YMR005W SEC72P39742 193 aaKnown RBP1.55□□□□□ -2.16
TAF4YMR005W EST3Q03096 181 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms