RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C CUP9P41817 306 aa1.87□□□□□ -2.11
PML39YML107C RPS12P48589 143 aaKnown RBP1.87□□□□□ -2.11
PML39YML107C AIM11P87275 137 aa1.87□□□□□ -2.11
PML39YML107C YMR252CQ04814 134 aa1.87□□□□□ -2.11
PML39YML107C HAP2P06774 265 aa1.86□□□□□ -2.11
PML39YML107C SPS2P08459 502 aa1.86□□□□□ -2.11
PML39YML107C YGL010WP25338 174 aa1.86□□□□□ -2.11
PML39YML107C PHS1P40857 217 aa1.86□□□□□ -2.11
PML39YML107C DOC1P53068 250 aa1.86□□□□□ -2.11
PML39YML107C YGR017WP53210 297 aa1.86□□□□□ -2.11
PML39YML107C SAY1P53324 424 aa1.86□□□□□ -2.11
PML39YML107C RIM9Q04734 239 aa1.86□□□□□ -2.11
PML39YML107C OCA6Q12454 224 aa1.86□□□□□ -2.11
PML39YML107C YOR381W-AQ3E804 55 aa1.86□□□□□ -2.11
PML39YML107C PAM17P36147 197 aa1.85□□□□□ -2.11
PML39YML107C YHL042WP38729 150 aa1.85□□□□□ -2.11
PML39YML107C RPB11P38902 120 aa1.85□□□□□ -2.11
PML39YML107C YAR029WP39549 74 aa1.85□□□□□ -2.11
PML39YML107C YAL064WP39711 94 aa1.85□□□□□ -2.11
PML39YML107C DIE2P50076 525 aa1.85□□□□□ -2.11
PML39YML107C YGL230CP53074 147 aa1.85□□□□□ -2.11
PML39YML107C YNR077CP53758 84 aa1.85□□□□□ -2.11
PML39YML107C ELC1Q03071 99 aa1.85□□□□□ -2.11
PML39YML107C YLR162WQ06235 118 aa1.85□□□□□ -2.11
PML39YML107C DDP1Q99321 188 aaKnown RBP1.85□□□□□ -2.11
PML39YML107C RAD6P06104 172 aa1.84□□□□□ -2.11
PML39YML107C YPT31P38555 223 aaKnown RBP1.84□□□□□ -2.11
PML39YML107C YEL073CP39974 107 aa1.84□□□□□ -2.11
PML39YML107C NSE4P43124 402 aa1.84□□□□□ -2.11
PML39YML107C EMC4P53073 190 aa1.84□□□□□ -2.11
PML39YML107C YNR064CP53750 290 aa1.84□□□□□ -2.11
PML39YML107C ZEO1Q08245 113 aa1.84□□□□□ -2.11
PML39YML107C FCF2Q12035 217 aaPredicted RBP1.84□□□□□ -2.11
PML39YML107C YOR015WQ12169 119 aa1.84□□□□□ -2.11
PML39YML107C FPR1P20081 114 aaKnown RBP1.83□□□□□ -2.12
PML39YML107C GAA1P39012 614 aa1.83□□□□□ -2.12
PML39YML107C RPL13BP40212 199 aaKnown RBP1.83□□□□□ -2.12
PML39YML107C YDL241WQ07738 123 aa1.83□□□□□ -2.12
PML39YML107C IRC23Q08416 157 aa1.83□□□□□ -2.12
PML39YML107C RTR2Q12378 196 aa1.83□□□□□ -2.12
PML39YML107C RPL13AQ12690 199 aaPredicted RBP1.83□□□□□ -2.12
PML39YML107C ANB1P19211 157 aa1.82□□□□□ -2.12
PML39YML107C TMA19P35691 167 aaKnown RBP1.82□□□□□ -2.12
PML39YML107C SFT2P38166 215 aa1.82□□□□□ -2.12
PML39YML107C CCS1P40202 249 aaKnown RBP1.82□□□□□ -2.12
PML39YML107C PAM16P42949 149 aa1.82□□□□□ -2.12
PML39YML107C LIP1Q03579 150 aa1.82□□□□□ -2.12
PML39YML107C SHH3Q04487 196 aa1.82□□□□□ -2.12
PML39YML107C UPS1Q05776 175 aa1.82□□□□□ -2.12
PML39YML107C ATG10Q07879 167 aa1.82□□□□□ -2.12
PML39YML107C SCP1Q08873 200 aa1.82□□□□□ -2.12
PML39YML107C YLR422WQ06409 1932 aa1.81□□□□□ -2.12
PML39YML107C YMR295CQ03559 197 aa1.81□□□□□ -2.12
PML39YML107C DML1Q03652 475 aa1.81□□□□□ -2.12
PML39YML107C YOR385WQ08909 290 aa1.81□□□□□ -2.12
PML39YML107C SCS22Q6Q595 175 aa1.81□□□□□ -2.12
PML39YML107C DUR1,2P32528 1835 aaKnown RBP1.81□□□□□ -2.12
PML39YML107C QCR8P08525 94 aa1.8□□□□□ -2.12
PML39YML107C INO4P13902 151 aa1.8□□□□□ -2.12
PML39YML107C MAK31P23059 88 aa1.8□□□□□ -2.12
PML39YML107C YEL067CP39978 195 aa1.8□□□□□ -2.12
PML39YML107C RIO2P40160 425 aaKnown RBP1.8□□□□□ -2.12
PML39YML107C YAE1P47118 141 aaPredicted RBP1.8□□□□□ -2.12
PML39YML107C MZM1Q03429 123 aaPredicted RBP1.8□□□□□ -2.12
PML39YML107C YMR103CQ04436 120 aa1.8□□□□□ -2.12
PML39YML107C UBC5P15732 148 aa1.79□□□□□ -2.12
PML39YML107C SRX1P36077 127 aa1.79□□□□□ -2.12
PML39YML107C YBR209WP38311 105 aa1.79□□□□□ -2.12
PML39YML107C FLX1P40464 311 aa1.79□□□□□ -2.12
PML39YML107C YFR035CP43608 114 aa1.79□□□□□ -2.12
PML39YML107C YCL001W-AP87012 153 aa1.79□□□□□ -2.12
PML39YML107C RCE1Q03530 315 aa1.79□□□□□ -2.12
PML39YML107C IRC19Q07843 230 aa1.79□□□□□ -2.12
PML39YML107C YGL194C-AQ2V2P6 80 aa1.79□□□□□ -2.12
PML39YML107C KTI11Q3E840 82 aa1.79□□□□□ -2.12
PML39YML107C ATG40Q99325 256 aa1.79□□□□□ -2.12
PML39YML107C YLR236CA0A023PZG4 107 aa1.78□□□□□ -2.12
PML39YML107C SEC59P20048 519 aa1.78□□□□□ -2.12
PML39YML107C HYP2P23301 157 aaKnown RBP1.78□□□□□ -2.12
PML39YML107C QCR10P37299 77 aa1.78□□□□□ -2.12
PML39YML107C YBR090CP38253 122 aa1.78□□□□□ -2.12
PML39YML107C AIM18P38884 321 aa1.78□□□□□ -2.12
PML39YML107C YEA6P39953 335 aa1.78□□□□□ -2.12
PML39YML107C GNA1P43577 159 aaPredicted RBP1.78□□□□□ -2.12
PML39YML107C RRT7Q07829 113 aa1.78□□□□□ -2.12
PML39YML107C COX5BP00425 151 aa1.77□□□□□ -2.13
PML39YML107C HAP3P13434 144 aa1.77□□□□□ -2.13
PML39YML107C MRPL15P36523 253 aa1.77□□□□□ -2.13
PML39YML107C YBR242WP38331 238 aa1.77□□□□□ -2.13
PML39YML107C YHL018WP38744 120 aaPredicted RBP1.77□□□□□ -2.13
PML39YML107C SPG1P50088 95 aa1.77□□□□□ -2.13
PML39YML107C SOM1Q05676 74 aa1.77□□□□□ -2.13
PML39YML107C YPR174CQ06616 221 aaPredicted RBP1.77□□□□□ -2.13
PML39YML107C ATG41Q12048 136 aa1.77□□□□□ -2.13
PML39YML107C YPR013CQ12145 317 aa1.77□□□□□ -2.13
PML39YML107C YCR075W-AQ3E830 75 aa1.77□□□□□ -2.13
PML39YML107C MED11Q99278 115 aa1.77□□□□□ -2.13
PML39YML107C YCR099CP25657 155 aa1.76□□□□□ -2.13
PML39YML107C SNF11P38956 169 aa1.76□□□□□ -2.13
PML39YML107C LSM8P47093 109 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms