RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W RPC10P40422 70 aa-0.37□□□□□ -2.47
PRP39YML046W LST8P41318 303 aa-0.37□□□□□ -2.47
PRP39YML046W COG5P53951 403 aa-0.37□□□□□ -2.47
PRP39YML046W DAD4P69851 72 aa-0.37□□□□□ -2.47
PRP39YML046W YMR253CQ04835 414 aa-0.37□□□□□ -2.47
PRP39YML046W NAT3Q06504 195 aa-0.37□□□□□ -2.47
PRP39YML046W YOR020W-AQ3E824 90 aa-0.37□□□□□ -2.47
PRP39YML046W RPS22AP0C0W1 130 aaKnown RBP-0.38□□□□□ -2.47
PRP39YML046W YPR170W-BP0C5R9 85 aa-0.38□□□□□ -2.47
PRP39YML046W YCR023CP25351 611 aa-0.38□□□□□ -2.47
PRP39YML046W ASF2P32448 525 aaPredicted RBP-0.38□□□□□ -2.47
PRP39YML046W SRP102P36057 244 aaPredicted RBP-0.38□□□□□ -2.47
PRP39YML046W SNU13P39990 126 aaKnown RBP-0.38□□□□□ -2.47
PRP39YML046W GVP36P40531 326 aaKnown RBP-0.38□□□□□ -2.47
PRP39YML046W DIE2P50076 525 aa-0.38□□□□□ -2.47
PRP39YML046W YGL235WP53071 178 aa-0.38□□□□□ -2.47
PRP39YML046W PMP3P87284 55 aa-0.38□□□□□ -2.47
PRP39YML046W RNH202Q05635 350 aa-0.38□□□□□ -2.47
PRP39YML046W ATG17Q06410 417 aa-0.38□□□□□ -2.47
PRP39YML046W YPR127WQ06494 345 aa-0.38□□□□□ -2.47
PRP39YML046W YOR072WQ08486 104 aa-0.38□□□□□ -2.47
PRP39YML046W RPS22BQ3E7Y3 130 aaKnown RBP-0.38□□□□□ -2.47
PRP39YML046W RPL27AP0C2H6 136 aaKnown RBP-0.39□□□□□ -2.47
PRP39YML046W MATALPHA2P0CY08 210 aa-0.39□□□□□ -2.47
PRP39YML046W HMLALPHA2P0CY09 210 aa-0.39□□□□□ -2.47
PRP39YML046W SNF4P12904 322 aa-0.39□□□□□ -2.47
PRP39YML046W STE18P18852 110 aa-0.39□□□□□ -2.47
PRP39YML046W CAF4P36130 643 aa-0.39□□□□□ -2.47
PRP39YML046W SHB17P36136 271 aaKnown RBP-0.39□□□□□ -2.47
PRP39YML046W UTP30P36144 274 aaKnown RBP-0.39□□□□□ -2.47
PRP39YML046W PAM17P36147 197 aa-0.39□□□□□ -2.47
PRP39YML046W FMP32P43557 207 aa-0.39□□□□□ -2.47
PRP39YML046W UBC12P52491 188 aa-0.39□□□□□ -2.47
PRP39YML046W MPC3P53311 146 aa-0.39□□□□□ -2.47
PRP39YML046W YNL190WP53872 204 aa-0.39□□□□□ -2.47
PRP39YML046W SNZ1Q03148 297 aa-0.39□□□□□ -2.47
PRP39YML046W AIM34Q03673 198 aa-0.39□□□□□ -2.47
PRP39YML046W YDR286CQ05530 114 aa-0.39□□□□□ -2.47
PRP39YML046W DGK1Q12382 290 aa-0.39□□□□□ -2.47
PRP39YML046W RDI1Q12434 202 aa-0.39□□□□□ -2.47
PRP39YML046W FMP16Q12497 93 aa-0.39□□□□□ -2.47
PRP39YML046W TSC3Q3E790 80 aa-0.39□□□□□ -2.47
PRP39YML046W YLR255CO13574 117 aa-0.39□□□□□ -2.47
PRP39YML046W YCR101CP25607 182 aa-0.39□□□□□ -2.47
PRP39YML046W ARO7P32178 256 aa-0.39□□□□□ -2.47
PRP39YML046W SPI1P40092 148 aa-0.39□□□□□ -2.47
PRP39YML046W POG1P40473 351 aa-0.39□□□□□ -2.47
PRP39YML046W OTU1P43558 301 aa-0.39□□□□□ -2.47
PRP39YML046W YGL230CP53074 147 aa-0.39□□□□□ -2.47
PRP39YML046W PDR17P53844 350 aa-0.39□□□□□ -2.47
PRP39YML046W YNL019CP53975 284 aa-0.39□□□□□ -2.47
PRP39YML046W YDR366CP87287 132 aa-0.39□□□□□ -2.47
PRP39YML046W ABF2Q02486 183 aa-0.39□□□□□ -2.47
PRP39YML046W MGR3Q04472 501 aa-0.39□□□□□ -2.47
PRP39YML046W YOL164W-AQ3E7A5 60 aa-0.39□□□□□ -2.47
PRP39YML046W IGO2Q9P305 131 aa-0.39□□□□□ -2.47
PRP39YML046W POR1P04840 283 aaKnown RBP-0.4□□□□□ -2.47
PRP39YML046W YGL041W-AP0C5N3 154 aa-0.4□□□□□ -2.47
PRP39YML046W URA5P13298 226 aaKnown RBP-0.4□□□□□ -2.47
PRP39YML046W SPT14P32363 452 aa-0.4□□□□□ -2.47
PRP39YML046W YBL010CP32788 280 aa-0.4□□□□□ -2.47
PRP39YML046W EMP24P32803 203 aaKnown RBP-0.4□□□□□ -2.47
PRP39YML046W MPM1P40364 252 aa-0.4□□□□□ -2.47
PRP39YML046W MVB12P42939 101 aa-0.4□□□□□ -2.47
PRP39YML046W AIM25P47140 327 aa-0.4□□□□□ -2.47
PRP39YML046W NQM1P53228 333 aaPredicted RBP-0.4□□□□□ -2.47
PRP39YML046W YGR050CP53231 118 aa-0.4□□□□□ -2.47
PRP39YML046W RRP17Q04031 235 aaPredicted RBP-0.4□□□□□ -2.47
PRP39YML046W KRE28Q04431 385 aa-0.4□□□□□ -2.47
PRP39YML046W SPT3P06844 337 aa-0.41□□□□□ -2.47
PRP39YML046W ATP15P21306 62 aa-0.41□□□□□ -2.47
PRP39YML046W GSP2P32836 220 aaKnown RBP-0.41□□□□□ -2.47
PRP39YML046W COX23P38824 151 aa-0.41□□□□□ -2.47
PRP39YML046W IKI1P38874 309 aa-0.41□□□□□ -2.47
PRP39YML046W ILM1P47155 203 aa-0.41□□□□□ -2.47
PRP39YML046W PRM8P53174 237 aa-0.41□□□□□ -2.47
PRP39YML046W YGR025WP53216 100 aa-0.41□□□□□ -2.47
PRP39YML046W DID2P69771 204 aa-0.41□□□□□ -2.47
PRP39YML046W COF1Q03048 143 aaKnown RBP-0.41□□□□□ -2.47
PRP39YML046W DML1Q03652 475 aa-0.41□□□□□ -2.47
PRP39YML046W YMD8Q03697 442 aa-0.41□□□□□ -2.47
PRP39YML046W YPR145C-AQ2V2P0 78 aa-0.41□□□□□ -2.47
PRP39YML046W TDA8Q6B2U8 126 aa-0.41□□□□□ -2.47
PRP39YML046W HUG1Q6Q5K6 68 aa-0.41□□□□□ -2.47
PRP39YML046W DDP1Q99321 188 aaKnown RBP-0.41□□□□□ -2.47
PRP39YML046W ENV10Q99382 181 aa-0.41□□□□□ -2.47
PRP39YML046W QCR6P00127 147 aa-0.41□□□□□ -2.48
PRP39YML046W URA6P15700 204 aa-0.41□□□□□ -2.48
PRP39YML046W YMR31P19955 123 aa-0.41□□□□□ -2.48
PRP39YML046W PRE1P22141 198 aaKnown RBP-0.41□□□□□ -2.48
PRP39YML046W RPS1AP33442 255 aaKnown RBP-0.41□□□□□ -2.48
PRP39YML046W APS1P35181 156 aa-0.41□□□□□ -2.48
PRP39YML046W YKR041WP36134 250 aa-0.41□□□□□ -2.48
PRP39YML046W YBR027CP38220 110 aa-0.41□□□□□ -2.48
PRP39YML046W NSE4P43124 402 aa-0.41□□□□□ -2.48
PRP39YML046W YAR1P46683 200 aa-0.41□□□□□ -2.48
PRP39YML046W BXI1P48558 297 aa-0.41□□□□□ -2.48
PRP39YML046W DDR2P89113 61 aa-0.41□□□□□ -2.48
PRP39YML046W YDR042CQ03205 200 aa-0.41□□□□□ -2.48
PRP39YML046W YMR295CQ03559 197 aa-0.41□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms