RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YNL200CP40165 246 aaKnown RBP7.46□□□□□ -1.22
SHH4YLR164W BRP1P53194 125 aa7.46□□□□□ -1.22
SHH4YLR164W MED7Q08278 222 aa7.46□□□□□ -1.22
SHH4YLR164W YPR053CQ6Q5F3 151 aa7.46□□□□□ -1.22
SHH4YLR164W Q0255P03881 472 aa7.45□□□□□ -1.22
SHH4YLR164W YER134CP40081 178 aa7.45□□□□□ -1.22
SHH4YLR164W COX16P47081 118 aa7.45□□□□□ -1.22
SHH4YLR164W CUE4Q04201 117 aaPredicted RBP7.45□□□□□ -1.22
SHH4YLR164W POM33Q12164 279 aa7.45□□□□□ -1.22
SHH4YLR164W FRS1P15624 595 aaKnown RBP7.44□□□□□ -1.22
SHH4YLR164W GSP1P32835 219 aaKnown RBP7.44□□□□□ -1.22
SHH4YLR164W GSP2P32836 220 aaKnown RBP7.44□□□□□ -1.22
SHH4YLR164W RRT13P40042 185 aa7.44□□□□□ -1.22
SHH4YLR164W TMA17Q12513 150 aa7.44□□□□□ -1.22
SHH4YLR164W WIP1Q2V2P8 89 aa7.44□□□□□ -1.22
SHH4YLR164W RPS11AP0CX47 156 aaKnown RBP7.43□□□□□ -1.22
SHH4YLR164W RPS11BP0CX48 156 aaKnown RBP7.43□□□□□ -1.22
SHH4YLR164W VHS2P40463 436 aa7.43□□□□□ -1.22
SHH4YLR164W KEG1P43614 200 aa7.43□□□□□ -1.22
SHH4YLR164W OST3P48439 350 aa7.43□□□□□ -1.22
SHH4YLR164W ERG27Q12452 347 aaKnown RBP7.43□□□□□ -1.22
SHH4YLR164W RPL2AP0CX45 254 aaKnown RBP7.42□□□□□ -1.22
SHH4YLR164W RPL2BP0CX46 254 aaKnown RBP7.42□□□□□ -1.22
SHH4YLR164W MLF3P32047 452 aa7.42□□□□□ -1.22
SHH4YLR164W COX12Q01519 83 aa7.42□□□□□ -1.22
SHH4YLR164W YLR122CQ12312 125 aa7.42□□□□□ -1.22
SHH4YLR164W YJL028WP47062 111 aa7.41□□□□□ -1.22
SHH4YLR164W YIL014C-AQ02598 104 aa7.41□□□□□ -1.22
SHH4YLR164W YLR281CQ05863 155 aa7.41□□□□□ -1.22
SHH4YLR164W YIL134C-AQ45U18 67 aa7.41□□□□□ -1.22
SHH4YLR164W CDC40P40968 455 aaPredicted RBP7.4□□□□□ -1.22
SHH4YLR164W YDR366CP87287 132 aa7.4□□□□□ -1.22
SHH4YLR164W CMC2Q3E7A4 109 aa7.4□□□□□ -1.22
SHH4YLR164W AUA1P32450 94 aa7.39□□□□□ -1.23
SHH4YLR164W PRE1P22141 198 aaKnown RBP7.38□□□□□ -1.23
SHH4YLR164W YCR001WP25347 104 aa7.38□□□□□ -1.23
SHH4YLR164W TEM1P38987 245 aa7.38□□□□□ -1.23
SHH4YLR164W AIM34Q03673 198 aa7.38□□□□□ -1.23
SHH4YLR164W YLR042CQ07990 161 aa7.38□□□□□ -1.23
SHH4YLR164W YPR014CQ6B0W2 109 aa7.38□□□□□ -1.23
SHH4YLR164W YCR023CP25351 611 aa7.37□□□□□ -1.23
SHH4YLR164W KTI12P34253 313 aaKnown RBP7.37□□□□□ -1.23
SHH4YLR164W SEC72P39742 193 aaKnown RBP7.37□□□□□ -1.23
SHH4YLR164W SAL1D6W196 494 aa7.36□□□□□ -1.23
SHH4YLR164W YGL118CP53132 145 aa7.36□□□□□ -1.23
SHH4YLR164W TVP18Q04767 167 aa7.36□□□□□ -1.23
SHH4YLR164W RDS3Q06835 107 aaPredicted RBP7.36□□□□□ -1.23
SHH4YLR164W CYC7P00045 113 aa7.35□□□□□ -1.23
SHH4YLR164W YER076CP40049 302 aa7.35□□□□□ -1.23
SHH4YLR164W NUP42P49686 430 aaKnown RBP7.35□□□□□ -1.23
SHH4YLR164W YPS5P53057 165 aa7.35□□□□□ -1.23
SHH4YLR164W MGR2Q02889 113 aa7.35□□□□□ -1.23
SHH4YLR164W MRPL11P36521 249 aaPredicted RBP7.34□□□□□ -1.23
SHH4YLR164W ATP23P53722 227 aa7.34□□□□□ -1.23
SHH4YLR164W AQY1P0CD91 305 aa7.33□□□□□ -1.24
SHH4YLR164W RPL42AP0CX27 106 aaKnown RBP7.33□□□□□ -1.24
SHH4YLR164W RPL42BP0CX28 106 aaKnown RBP7.33□□□□□ -1.24
SHH4YLR164W PFY1P07274 126 aa7.32□□□□□ -1.24
SHH4YLR164W KRE9P39005 276 aa7.32□□□□□ -1.24
SHH4YLR164W YNL217WP40152 326 aa7.32□□□□□ -1.24
SHH4YLR164W POP3P53833 195 aaPredicted RBP7.32□□□□□ -1.24
SHH4YLR164W YRA2P36036 203 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
SHH4YLR164W ELF1P36053 145 aa7.31□□□□□ -1.24
SHH4YLR164W DCV1P43595 202 aa7.31□□□□□ -1.24
SHH4YLR164W SCW10Q04951 389 aa7.31□□□□□ -1.24
SHH4YLR164W FCF1Q05498 189 aaPredicted RBP7.31□□□□□ -1.24
SHH4YLR164W YPT53P36019 220 aa7.3□□□□□ -1.24
SHH4YLR164W YCH1P42937 148 aa7.3□□□□□ -1.24
SHH4YLR164W GLO1P50107 326 aa7.3□□□□□ -1.24
SHH4YLR164W DPP1Q05521 289 aa7.29□□□□□ -1.24
SHH4YLR164W VAM10Q08474 114 aa7.29□□□□□ -1.24
SHH4YLR164W DGA1Q08650 418 aa7.29□□□□□ -1.24
SHH4YLR164W COA6Q3E846 104 aa7.29□□□□□ -1.24
SHH4YLR164W PCL2P25693 308 aa7.28□□□□□ -1.24
SHH4YLR164W PAU16P35994 123 aa7.28□□□□□ -1.24
SHH4YLR164W YDR042CQ03205 200 aa7.28□□□□□ -1.24
SHH4YLR164W TPT1Q12272 230 aaKnown RBP7.28□□□□□ -1.24
SHH4YLR164W SCS22Q6Q595 175 aa7.27□□□□□ -1.25
SHH4YLR164W YKR070WP36151 352 aaKnown RBP7.26□□□□□ -1.25
SHH4YLR164W FYV4P38783 130 aaPredicted RBP7.26□□□□□ -1.25
SHH4YLR164W TOS6P48560 102 aa7.26□□□□□ -1.25
SHH4YLR164W RPL16AP26784 199 aaKnown RBP7.25□□□□□ -1.25
SHH4YLR164W YJR146WP47174 117 aa7.25□□□□□ -1.25
SHH4YLR164W YLR112WQ12130 139 aa7.25□□□□□ -1.25
SHH4YLR164W YCR075W-AQ3E830 75 aa7.25□□□□□ -1.25
SHH4YLR164W UBC5P15732 148 aa7.24□□□□□ -1.25
SHH4YLR164W YGL088WP53151 121 aa7.24□□□□□ -1.25
SHH4YLR164W ERV14P53173 138 aa7.24□□□□□ -1.25
SHH4YLR164W SGF11Q03067 99 aa7.24□□□□□ -1.25
SHH4YLR164W COA3Q3E7B2 85 aa7.24□□□□□ -1.25
SHH4YLR164W HMRA2P0CY13 119 aa7.23□□□□□ -1.25
SHH4YLR164W FUN14P18411 198 aa7.23□□□□□ -1.25
SHH4YLR164W LSM8P47093 109 aaKnown RBP7.23□□□□□ -1.25
SHH4YLR164W PKR1Q03880 122 aaKnown RBP7.23□□□□□ -1.25
SHH4YLR164W SEC11P15367 167 aa7.22□□□□□ -1.25
SHH4YLR164W HAL1Q01766 294 aa7.22□□□□□ -1.25
SHH4YLR164W YGR240C-AQ3E786 66 aa7.22□□□□□ -1.25
SHH4YLR164W YBR126W-AQ8TGU7 68 aa7.22□□□□□ -1.25
SHH4YLR164W RPL27BP0C2H7 136 aaKnown RBP7.21□□□□□ -1.26
SHH4YLR164W SCM4P32564 187 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms