RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	YPI1	P43587	155 aa		4.23	□□□□□ -1.73
RPT1	YKL145W	GPI2	P46961	280 aa		4.23	□□□□□ -1.73
RPT1	YKL145W	UBC7	Q02159	165 aa		4.23	□□□□□ -1.73
RPT1	YKL145W	SMT3	Q12306	101 aa	Known RBP	4.23	□□□□□ -1.73
RPT1	YKL145W	YLR118C	Q12354	227 aa		4.23	□□□□□ -1.73
RPT1	YKL145W	YAL063C-A	Q3E791	96 aa		4.23	□□□□□ -1.73
RPT1	YKL145W	DDI2	P0CH63	225 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	DDI3	P0CH64	225 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	YGL010W	P25338	174 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	MRPL28	P36527	147 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	HSP10	P38910	106 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	OXA1	P39952	402 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	YGR025W	P53216	100 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	YGR026W	P53217	278 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	CAX4	P53223	239 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	PPT2	Q12036	173 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	YPR013C	Q12145	317 aa		4.22	□□□□□ -1.73
RPT1	YKL145W	YMR141C	P40211	102 aa		4.21	□□□□□ -1.73
RPT1	YKL145W	GTT1	P40582	234 aa		4.21	□□□□□ -1.73
RPT1	YKL145W	RPA43	P46669	326 aa		4.21	□□□□□ -1.73
RPT1	YKL145W	YGL034C	P53186	121 aa		4.21	□□□□□ -1.73
RPT1	YKL145W	APS2	Q00381	147 aa		4.21	□□□□□ -1.73
RPT1	YKL145W	CPT1	P17898	393 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	SRP21	P32342	167 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	YBR013C	P38215	129 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	SNF11	P38956	169 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	MRPL49	P40858	161 aa	Predicted RBP	4.21	□□□□□ -1.74
RPT1	YKL145W	YOL160W	Q08321	113 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	PRM3	Q08931	133 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	YCL001W-B	Q96VH2	84 aa		4.21	□□□□□ -1.74
RPT1	YKL145W	NHP6A	P11632	93 aa	Known RBP	4.2	□□□□□ -1.74
RPT1	YKL145W	ARO2	P28777	376 aa	Known RBP	4.2	□□□□□ -1.74
RPT1	YKL145W	FZF1	P32805	299 aa		4.2	□□□□□ -1.74
RPT1	YKL145W	PEX17	P40155	199 aa		4.2	□□□□□ -1.74
RPT1	YKL145W	AGE2	P40529	298 aa		4.2	□□□□□ -1.74
RPT1	YKL145W	ATG39	Q06159	398 aa		4.2	□□□□□ -1.74
RPT1	YKL145W	YGR035W-A	Q45U48	73 aa		4.2	□□□□□ -1.74
RPT1	YKL145W	CUP2	P15315	225 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	PRY2	P36110	329 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	ECM33	P38248	429 aa	Known RBP	4.19	□□□□□ -1.74
RPT1	YKL145W	PAU5	P43575	122 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	DAD4	P69851	72 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	ATP19	P81451	68 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	YDR115W	Q04598	105 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	YOR105W	Q08504	108 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	YOR011W-A	Q3E807	68 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	YNR034W-A	Q3E841	98 aa		4.19	□□□□□ -1.74
RPT1	YKL145W	YHR212W-A	P0CX91	67 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	PAM17	P36147	197 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	MIG3	P39943	394 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	YFR045W	P43617	309 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	DAD1	Q12248	94 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	PRM7	Q12459	698 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	TAR1	Q8TGM6	124 aa		4.18	□□□□□ -1.74
RPT1	YKL145W	YHR139C-A	O13536	103 aa		4.17	□□□□□ -1.74
RPT1	YKL145W	SEC4	P07560	215 aa	Known RBP	4.17	□□□□□ -1.74
RPT1	YKL145W	TIR1	P10863	254 aa		4.17	□□□□□ -1.74
RPT1	YKL145W	PRE5	P40302	234 aa	Known RBP	4.17	□□□□□ -1.74
RPT1	YKL145W	PAU19	P0CE85	124 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	PAU21	P0CE86	164 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	PAU22	P0CE87	164 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	PAU3	P25610	124 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	YKL102C	P34249	101 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	APS1	P35181	156 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	YKR041W	P36134	250 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	YMR244W	Q04018	355 aa		4.16	□□□□□ -1.74
RPT1	YKL145W	MRPL31	P14063	131 aa	Predicted RBP	4.15	□□□□□ -1.74
RPT1	YKL145W	IRC22	P40006	225 aa		4.15	□□□□□ -1.74
RPT1	YKL145W	TDA4	P47153	279 aa		4.15	□□□□□ -1.74
RPT1	YKL145W	YLR342W-A	Q3E810	57 aa		4.15	□□□□□ -1.74
RPT1	YKL145W	YOL085C	Q99345	113 aa		4.15	□□□□□ -1.74
RPT1	YKL145W	POR1	P04840	283 aa	Known RBP	4.14	□□□□□ -1.75
RPT1	YKL145W	HMRA1	P0CY11	126 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	UTR5	P32630	166 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	RPB11	P38902	120 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	EDC2	P40023	145 aa	Predicted RBP	4.14	□□□□□ -1.75
RPT1	YKL145W	IGD1	P43598	195 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	YGR017W	P53210	297 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	ARL3	Q02804	198 aa		4.14	□□□□□ -1.75
RPT1	YKL145W	YHR022C	P38763	256 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	KRE9	P39005	276 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	YER076C	P40049	302 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	YER135C	P40082	130 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	YPL162C	Q12042	273 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	YNL146C-A	Q3E7Z1	64 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	YBL008W-A	Q3E821	79 aa		4.13	□□□□□ -1.75
RPT1	YKL145W	MIG1	P27705	504 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	ABF2	Q02486	183 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	YLR050C	Q12155	161 aa	Known RBP	4.12	□□□□□ -1.75
RPT1	YKL145W	TIM22	Q12328	207 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	DFM1	Q12743	341 aa	Known RBP	4.12	□□□□□ -1.75
RPT1	YKL145W	IGO2	Q9P305	131 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	DYN1	P36022	4092 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	MPC2	P38857	129 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	SPI1	P40092	148 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	THG1	P53215	237 aa	Known RBP	4.12	□□□□□ -1.75
RPT1	YKL145W	CYT2	Q00873	224 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	MRPS8	Q03799	155 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	CCW12	Q12127	133 aa		4.12	□□□□□ -1.75
RPT1	YKL145W	SSS1	P35179	80 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms