RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W YPR145C-AQ2V2P0 78 aa3.24□□□□□ -1.89
PRP40YKL012W YOL162WP0CF19 215 aa3.23□□□□□ -1.89
PRP40YKL012W YCR101CP25607 182 aa3.23□□□□□ -1.89
PRP40YKL012W GCV3P39726 170 aaPredicted RBP3.23□□□□□ -1.89
PRP40YKL012W MET31Q03081 177 aa3.23□□□□□ -1.89
PRP40YKL012W SEN15Q04675 128 aa3.23□□□□□ -1.89
PRP40YKL012W ATG10Q07879 167 aa3.23□□□□□ -1.89
PRP40YKL012W PAM16P42949 149 aa3.23□□□□□ -1.89
PRP40YKL012W YNR064CP53750 290 aa3.23□□□□□ -1.89
PRP40YKL012W MRP17P28778 131 aa3.22□□□□□ -1.89
PRP40YKL012W EMC4P53073 190 aa3.22□□□□□ -1.89
PRP40YKL012W YPR114WQ06107 315 aa3.22□□□□□ -1.89
PRP40YKL012W YLR099W-AQ3E798 87 aa3.22□□□□□ -1.89
PRP40YKL012W SUI1P32911 108 aaKnown RBP3.21□□□□□ -1.9
PRP40YKL012W YPT31P38555 223 aaKnown RBP3.21□□□□□ -1.9
PRP40YKL012W VMA21P41806 77 aa3.21□□□□□ -1.9
PRP40YKL012W RUB1Q03919 77 aa3.21□□□□□ -1.9
PRP40YKL012W HRD1Q08109 551 aa3.21□□□□□ -1.9
PRP40YKL012W FUN14P18411 198 aa3.2□□□□□ -1.9
PRP40YKL012W MRPL15P36523 253 aa3.2□□□□□ -1.9
PRP40YKL012W MRPL24P36525 258 aaPredicted RBP3.2□□□□□ -1.9
PRP40YKL012W YBR013CP38215 129 aa3.2□□□□□ -1.9
PRP40YKL012W POP7P38291 140 aa3.2□□□□□ -1.9
PRP40YKL012W SEC59P20048 519 aa3.2□□□□□ -1.9
PRP40YKL012W PAU24P38155 120 aa3.2□□□□□ -1.9
PRP40YKL012W CCS1P40202 249 aaKnown RBP3.2□□□□□ -1.9
PRP40YKL012W RPL13BP40212 199 aaKnown RBP3.2□□□□□ -1.9
PRP40YKL012W KEI1Q06346 221 aa3.2□□□□□ -1.9
PRP40YKL012W RPL13AQ12690 199 aaPredicted RBP3.2□□□□□ -1.9
PRP40YKL012W RPB7P34087 171 aa3.19□□□□□ -1.9
PRP40YKL012W FLX1P40464 311 aa3.19□□□□□ -1.9
PRP40YKL012W MOB1P40484 314 aa3.19□□□□□ -1.9
PRP40YKL012W EMC5P40540 141 aa3.19□□□□□ -1.9
PRP40YKL012W YML079WQ03629 201 aa3.19□□□□□ -1.9
PRP40YKL012W RPL40AP0CH08 128 aaKnown RBP3.18□□□□□ -1.9
PRP40YKL012W RPL40BP0CH09 128 aaKnown RBP3.18□□□□□ -1.9
PRP40YKL012W YGR042WP53227 271 aa3.18□□□□□ -1.9
PRP40YKL012W PAU12P53343 120 aa3.18□□□□□ -1.9
PRP40YKL012W YDR366CP87287 132 aa3.18□□□□□ -1.9
PRP40YKL012W CWC27Q02770 301 aa3.18□□□□□ -1.9
PRP40YKL012W YMR252CQ04814 134 aa3.18□□□□□ -1.9
PRP40YKL012W ELP6Q04868 273 aa3.18□□□□□ -1.9
PRP40YKL012W FYV7Q12247 151 aa3.18□□□□□ -1.9
PRP40YKL012W TAO3P40468 2376 aa3.18□□□□□ -1.9
PRP40YKL012W MRS4P23500 304 aa3.17□□□□□ -1.9
PRP40YKL012W GIM4P40005 111 aaKnown RBP3.17□□□□□ -1.9
PRP40YKL012W GLC8P41818 229 aa3.17□□□□□ -1.9
PRP40YKL012W FIT1Q04433 528 aa3.17□□□□□ -1.9
PRP40YKL012W YIL134C-AQ45U18 67 aa3.17□□□□□ -1.9
PRP40YKL012W INO4P13902 151 aa3.17□□□□□ -1.9
PRP40YKL012W YGL010WP25338 174 aa3.17□□□□□ -1.9
PRP40YKL012W CIN5P40917 295 aa3.17□□□□□ -1.9
PRP40YKL012W YGL204CP53089 101 aa3.17□□□□□ -1.9
PRP40YKL012W COA6Q3E846 104 aa3.17□□□□□ -1.9
PRP40YKL012W ADK1P07170 222 aaKnown RBP3.16□□□□□ -1.9
PRP40YKL012W QCR8P08525 94 aa3.16□□□□□ -1.9
PRP40YKL012W PAU2P32612 120 aa3.16□□□□□ -1.9
PRP40YKL012W MRPL11P36521 249 aaPredicted RBP3.16□□□□□ -1.9
PRP40YKL012W RPS20P38701 121 aaKnown RBP3.16□□□□□ -1.9
PRP40YKL012W YEL067CP39978 195 aa3.16□□□□□ -1.9
PRP40YKL012W COF1Q03048 143 aaKnown RBP3.16□□□□□ -1.9
PRP40YKL012W FCF2Q12035 217 aaPredicted RBP3.16□□□□□ -1.9
PRP40YKL012W YNR034W-AQ3E841 98 aa3.16□□□□□ -1.9
PRP40YKL012W FAS1P07149 2051 aaKnown RBP3.16□□□□□ -1.9
PRP40YKL012W KIN28P06242 306 aa3.15□□□□□ -1.9
PRP40YKL012W PAU15P40585 124 aa3.15□□□□□ -1.9
PRP40YKL012W SAE3P89114 91 aa3.15□□□□□ -1.9
PRP40YKL012W RCE1Q03530 315 aa3.15□□□□□ -1.9
PRP40YKL012W NMA1Q06178 401 aaKnown RBP3.15□□□□□ -1.9
PRP40YKL012W GPI2P46961 280 aa3.15□□□□□ -1.91
PRP40YKL012W EST3Q03096 181 aa3.15□□□□□ -1.91
PRP40YKL012W AVO2Q04749 426 aa3.15□□□□□ -1.91
PRP40YKL012W FRQ1Q06389 190 aa3.15□□□□□ -1.91
PRP40YKL012W RRT7Q07829 113 aa3.15□□□□□ -1.91
PRP40YKL012W YOR385WQ08909 290 aa3.15□□□□□ -1.91
PRP40YKL012W CYR1P08678 2026 aaKnown RBP3.14□□□□□ -1.91
PRP40YKL012W YGR269WP40326 108 aa3.14□□□□□ -1.91
PRP40YKL012W YPL067CQ02754 198 aa3.14□□□□□ -1.91
PRP40YKL012W YDL241WQ07738 123 aa3.14□□□□□ -1.91
PRP40YKL012W YLR146W-AQ2V2P1 62 aa3.14□□□□□ -1.91
PRP40YKL012W COX19Q3E731 98 aa3.14□□□□□ -1.91
PRP40YKL012W HAP3P13434 144 aa3.13□□□□□ -1.91
PRP40YKL012W DDR48P18899 430 aaKnown RBP3.13□□□□□ -1.91
PRP40YKL012W HSP12P22943 109 aaKnown RBP3.13□□□□□ -1.91
PRP40YKL012W BAT2P47176 376 aaKnown RBP3.13□□□□□ -1.91
PRP40YKL012W RPS25BP0C0T4 108 aaKnown RBP3.12□□□□□ -1.91
PRP40YKL012W PRE1P22141 198 aaKnown RBP3.12□□□□□ -1.91
PRP40YKL012W TMA23Q03525 211 aa3.12□□□□□ -1.91
PRP40YKL012W TVP18Q04767 167 aa3.12□□□□□ -1.91
PRP40YKL012W YLR118CQ12354 227 aa3.12□□□□□ -1.91
PRP40YKL012W RPS25AQ3E792 108 aaPredicted RBP3.12□□□□□ -1.91
PRP40YKL012W YNL146C-AQ3E7Z1 64 aa3.12□□□□□ -1.91
PRP40YKL012W COX9P07255 59 aa3.12□□□□□ -1.91
PRP40YKL012W PAU19P0CE85 124 aa3.12□□□□□ -1.91
PRP40YKL012W PAU21P0CE86 164 aa3.12□□□□□ -1.91
PRP40YKL012W PAU22P0CE87 164 aa3.12□□□□□ -1.91
PRP40YKL012W PAU3P25610 124 aa3.12□□□□□ -1.91
PRP40YKL012W GEP7P53171 287 aa3.12□□□□□ -1.91
PRP40YKL012W YGR039WP53225 103 aa3.12□□□□□ -1.91
PRP40YKL012W RFU1Q08003 200 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms