RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W YIL086CP40503 102 aa2.83□□□□□ -1.96
NUP85YJR042W IGD1P43598 195 aa2.83□□□□□ -1.96
NUP85YJR042W AIM11P87275 137 aa2.83□□□□□ -1.96
NUP85YJR042W YDR274CP87283 123 aa2.83□□□□□ -1.96
NUP85YJR042W HSP12P22943 109 aaKnown RBP2.82□□□□□ -1.96
NUP85YJR042W AGA2P32781 87 aa2.82□□□□□ -1.96
NUP85YJR042W MRPS9P38120 278 aa2.82□□□□□ -1.96
NUP85YJR042W YLR281CQ05863 155 aa2.82□□□□□ -1.96
NUP85YJR042W GPI18P38211 433 aa2.81□□□□□ -1.96
NUP85YJR042W YER134CP40081 178 aa2.81□□□□□ -1.96
NUP85YJR042W PHS1P40857 217 aa2.81□□□□□ -1.96
NUP85YJR042W ERG25P53045 309 aa2.81□□□□□ -1.96
NUP85YJR042W YMR082CQ04276 118 aa2.81□□□□□ -1.96
NUP85YJR042W IRC25Q07951 179 aa2.81□□□□□ -1.96
NUP85YJR042W SRL1Q08673 210 aa2.81□□□□□ -1.96
NUP85YJR042W RAD28Q12021 506 aa2.81□□□□□ -1.96
NUP85YJR042W YLR365WQ7LIF2 110 aa2.81□□□□□ -1.96
NUP85YJR042W PEX4P29340 183 aa2.81□□□□□ -1.96
NUP85YJR042W YAR068WP39564 161 aa2.81□□□□□ -1.96
NUP85YJR042W ECO1P43605 281 aa2.81□□□□□ -1.96
NUP85YJR042W PIN3Q06449 215 aa2.81□□□□□ -1.96
NUP85YJR042W NOP1P15646 327 aaKnown RBP2.8□□□□□ -1.96
NUP85YJR042W MDH2P22133 377 aa2.8□□□□□ -1.96
NUP85YJR042W SSS1P35179 80 aa2.8□□□□□ -1.96
NUP85YJR042W YBR013CP38215 129 aa2.8□□□□□ -1.96
NUP85YJR042W YHR125WP38831 101 aa2.8□□□□□ -1.96
NUP85YJR042W RPB11P38902 120 aa2.8□□□□□ -1.96
NUP85YJR042W YER135CP40082 130 aa2.8□□□□□ -1.96
NUP85YJR042W GAT4P40569 121 aa2.8□□□□□ -1.96
NUP85YJR042W ELC1Q03071 99 aa2.8□□□□□ -1.96
NUP85YJR042W YOR015WQ12169 119 aa2.8□□□□□ -1.96
NUP85YJR042W BLM10P43583 2143 aa2.8□□□□□ -1.96
NUP85YJR042W POR1P04840 283 aaKnown RBP2.8□□□□□ -1.96
NUP85YJR042W PAU19P0CE85 124 aa2.8□□□□□ -1.96
NUP85YJR042W PAU21P0CE86 164 aa2.8□□□□□ -1.96
NUP85YJR042W PAU22P0CE87 164 aa2.8□□□□□ -1.96
NUP85YJR042W PAU3P25610 124 aa2.8□□□□□ -1.96
NUP85YJR042W YCR050CP25630 102 aa2.8□□□□□ -1.96
NUP85YJR042W VMA11P32842 164 aa2.8□□□□□ -1.96
NUP85YJR042W FLX1P40464 311 aa2.8□□□□□ -1.96
NUP85YJR042W ERV14P53173 138 aa2.8□□□□□ -1.96
NUP85YJR042W CUE4Q04201 117 aaPredicted RBP2.8□□□□□ -1.96
NUP85YJR042W YMR090WQ04304 227 aaKnown RBP2.8□□□□□ -1.96
NUP85YJR042W AVO2Q04749 426 aa2.8□□□□□ -1.96
NUP85YJR042W YOR268CQ08734 132 aa2.8□□□□□ -1.96
NUP85YJR042W YPR108W-AQ3E7B3 70 aa2.8□□□□□ -1.96
NUP85YJR042W COA2Q3E823 68 aa2.8□□□□□ -1.96
NUP85YJR042W BEM2P39960 2167 aaKnown RBP2.79□□□□□ -1.96
NUP85YJR042W COX5BP00425 151 aa2.79□□□□□ -1.96
NUP85YJR042W CCS1P40202 249 aaKnown RBP2.79□□□□□ -1.96
NUP85YJR042W YGL230CP53074 147 aa2.79□□□□□ -1.96
NUP85YJR042W COA6Q3E846 104 aa2.79□□□□□ -1.96
NUP85YJR042W ISD11Q6Q560 94 aa2.79□□□□□ -1.96
NUP85YJR042W VPS13Q07878 3144 aa2.79□□□□□ -1.96
NUP85YJR042W YHR214C-DP0CX93 97 aa2.78□□□□□ -1.96
NUP85YJR042W ANB1P19211 157 aa2.78□□□□□ -1.96
NUP85YJR042W RPB7P34087 171 aa2.78□□□□□ -1.96
NUP85YJR042W HSP10P38910 106 aa2.78□□□□□ -1.96
NUP85YJR042W YAL064WP39711 94 aa2.78□□□□□ -1.96
NUP85YJR042W CUP9P41817 306 aa2.78□□□□□ -1.96
NUP85YJR042W CAX4P53223 239 aa2.78□□□□□ -1.96
NUP85YJR042W PAU4P53427 120 aa2.78□□□□□ -1.96
NUP85YJR042W POL2P21951 2222 aaKnown RBP2.78□□□□□ -1.96
NUP85YJR042W PAU1P0CE88 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU14P0CE89 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU6P0CE90 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU18P0CE91 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU8P0CE92 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU11P0CE93 120 aa2.78□□□□□ -1.96
NUP85YJR042W MRPL44P19956 98 aa2.78□□□□□ -1.96
NUP85YJR042W PAU13P38725 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU10Q03050 120 aa2.78□□□□□ -1.96
NUP85YJR042W CSI2Q08054 341 aa2.78□□□□□ -1.96
NUP85YJR042W PAU20Q08322 120 aa2.78□□□□□ -1.96
NUP85YJR042W PAU9Q3E770 120 aa2.78□□□□□ -1.96
NUP85YJR042W YOR032W-AQ8TGS1 66 aa2.78□□□□□ -1.96
NUP85YJR042W SCM4P32564 187 aa2.77□□□□□ -1.97
NUP85YJR042W YBL059WP34224 193 aa2.77□□□□□ -1.97
NUP85YJR042W RRT1P38192 103 aa2.77□□□□□ -1.97
NUP85YJR042W PAU5P43575 122 aa2.77□□□□□ -1.97
NUP85YJR042W CYT2Q00873 224 aa2.77□□□□□ -1.97
NUP85YJR042W SMD1Q02260 146 aaPredicted RBP2.77□□□□□ -1.97
NUP85YJR042W YIL046W-AQ3E7Z4 54 aa2.77□□□□□ -1.97
NUP85YJR042W HUG1Q6Q5K6 68 aa2.77□□□□□ -1.97
NUP85YJR042W SEC16P48415 2195 aaKnown RBP2.77□□□□□ -1.97
NUP85YJR042W FLO9P39712 1322 aa2.77□□□□□ -1.97
NUP85YJR042W YHR032W-AP0C5N6 59 aa2.77□□□□□ -1.97
NUP85YJR042W MID2P36027 376 aa2.77□□□□□ -1.97
NUP85YJR042W YHL042WP38729 150 aa2.77□□□□□ -1.97
NUP85YJR042W ARC15P40518 154 aaRIP-Chip data2.77□□□□□ -1.97not detected
NUP85YJR042W YOR381W-AQ3E804 55 aa2.77□□□□□ -1.97
NUP85YJR042W QCR9P22289 66 aa2.76□□□□□ -1.97
NUP85YJR042W SBH1P52870 82 aa2.76□□□□□ -1.97
NUP85YJR042W HAL1Q01766 294 aa2.76□□□□□ -1.97
NUP85YJR042W YCR075W-AQ3E830 75 aa2.76□□□□□ -1.97
NUP85YJR042W YDR034W-BQ6Q5X2 51 aa2.76□□□□□ -1.97
NUP85YJR042W ACC1Q00955 2233 aaKnown RBP2.76□□□□□ -1.97
NUP85YJR042W GON7P46984 123 aa2.76□□□□□ -1.97
NUP85YJR042W RPS22AP0C0W1 130 aaKnown RBP2.75□□□□□ -1.97
NUP85YJR042W ARO2P28777 376 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms