RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C YCH1P42937 148 aa7.25□□□□□ -1.25
MET28YIR017C DUO1P53168 247 aaKnown RBP7.25□□□□□ -1.25
MET28YIR017C ARC18Q05933 178 aaKnown RBP7.25□□□□□ -1.25
MET28YIR017C TY1A-HP0C2I4 478 aaKnown RBP7.24□□□□□ -1.25
MET28YIR017C RPL16BP26785 198 aaKnown RBP7.24□□□□□ -1.25
MET28YIR017C BRP1P53194 125 aa7.24□□□□□ -1.25
MET28YIR017C SCW10Q04951 389 aa7.24□□□□□ -1.25
MET28YIR017C WIP1Q2V2P8 89 aa7.24□□□□□ -1.25
MET28YIR017C YPR053CQ6Q5F3 151 aa7.24□□□□□ -1.25
MET28YIR017C POR1P04840 283 aaKnown RBP7.23□□□□□ -1.25
MET28YIR017C RPL23AP0CX41 137 aaKnown RBP7.23□□□□□ -1.25
MET28YIR017C RPL23BP0CX42 137 aaKnown RBP7.23□□□□□ -1.25
MET28YIR017C YCR001WP25347 104 aa7.23□□□□□ -1.25
MET28YIR017C AUA1P32450 94 aa7.23□□□□□ -1.25
MET28YIR017C YRA2P36036 203 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
MET28YIR017C AIM34Q03673 198 aa7.23□□□□□ -1.25
MET28YIR017C RRT13P40042 185 aa7.22□□□□□ -1.25
MET28YIR017C SGF11Q03067 99 aa7.22□□□□□ -1.25
MET28YIR017C TVP18Q04767 167 aa7.22□□□□□ -1.25
MET28YIR017C DXO1Q06349 442 aa7.22□□□□□ -1.25
MET28YIR017C VAM10Q08474 114 aa7.22□□□□□ -1.25
MET28YIR017C RDS3Q06835 107 aaPredicted RBP7.21□□□□□ -1.26
MET28YIR017C FSF1Q12029 327 aaKnown RBP7.2□□□□□ -1.26
MET28YIR017C YCR024C-BQ3E7Z8 88 aa7.2□□□□□ -1.26
MET28YIR017C MRPL28P36527 147 aa7.19□□□□□ -1.26
MET28YIR017C YPS5P53057 165 aa7.19□□□□□ -1.26
MET28YIR017C CYT2Q00873 224 aa7.19□□□□□ -1.26
MET28YIR017C ARL3Q02804 198 aa7.19□□□□□ -1.26
MET28YIR017C SEC4P07560 215 aaKnown RBP7.18□□□□□ -1.26
MET28YIR017C MRPL33P20084 86 aa7.18□□□□□ -1.26
MET28YIR017C YGR149WP48236 432 aa7.18□□□□□ -1.26
MET28YIR017C HAL1Q01766 294 aa7.18□□□□□ -1.26
MET28YIR017C ATP16Q12165 160 aa7.18□□□□□ -1.26
MET28YIR017C RPL42AP0CX27 106 aaKnown RBP7.17□□□□□ -1.26
MET28YIR017C RPL42BP0CX28 106 aaKnown RBP7.17□□□□□ -1.26
MET28YIR017C YLR042CQ07990 161 aa7.17□□□□□ -1.26
MET28YIR017C KTI12P34253 313 aaKnown RBP7.16□□□□□ -1.26
MET28YIR017C SDH8P38345 138 aa7.16□□□□□ -1.26
MET28YIR017C TEM1P38987 245 aa7.16□□□□□ -1.26
MET28YIR017C SEC72P39742 193 aaKnown RBP7.16□□□□□ -1.26
MET28YIR017C YGR240C-AQ3E786 66 aa7.16□□□□□ -1.26
MET28YIR017C YNL217WP40152 326 aa7.15□□□□□ -1.26
MET28YIR017C YKR032WP36127 104 aa7.14□□□□□ -1.27
MET28YIR017C YGL118CP53132 145 aa7.14□□□□□ -1.27
MET28YIR017C YCR023CP25351 611 aa7.13□□□□□ -1.27
MET28YIR017C DGA1Q08650 418 aa7.13□□□□□ -1.27
MET28YIR017C SAL1D6W196 494 aa7.12□□□□□ -1.27
MET28YIR017C KRE9P39005 276 aa7.12□□□□□ -1.27
MET28YIR017C ATP23P53722 227 aa7.12□□□□□ -1.27
MET28YIR017C PET8P38921 284 aa7.11□□□□□ -1.27
MET28YIR017C DCV1P43595 202 aa7.11□□□□□ -1.27
MET28YIR017C PMP3P87284 55 aa7.11□□□□□ -1.27
MET28YIR017C CMC2Q3E7A4 109 aa7.11□□□□□ -1.27
MET28YIR017C SSS1P35179 80 aa7.1□□□□□ -1.27
MET28YIR017C MED7Q08278 222 aa7.1□□□□□ -1.27
MET28YIR017C CRC1Q12289 327 aa7.1□□□□□ -1.27
MET28YIR017C YPR014CQ6B0W2 109 aa7.1□□□□□ -1.27
MET28YIR017C PFY1P07274 126 aa7.09□□□□□ -1.27
MET28YIR017C YPT53P36019 220 aa7.09□□□□□ -1.27
MET28YIR017C YER076CP40049 302 aa7.09□□□□□ -1.27
MET28YIR017C CDC40P40968 455 aaPredicted RBP7.09□□□□□ -1.27
MET28YIR017C HTL1Q9URQ5 78 aa7.09□□□□□ -1.27
MET28YIR017C YKR070WP36151 352 aaKnown RBP7.08□□□□□ -1.28
MET28YIR017C YNL200CP40165 246 aaKnown RBP7.08□□□□□ -1.28
MET28YIR017C GLO1P50107 326 aa7.08□□□□□ -1.28
MET28YIR017C YIL014C-AQ02598 104 aa7.08□□□□□ -1.28
MET28YIR017C GSP1P32835 219 aaKnown RBP7.07□□□□□ -1.28
MET28YIR017C GSP2P32836 220 aaKnown RBP7.07□□□□□ -1.28
MET28YIR017C YER134CP40081 178 aa7.07□□□□□ -1.28
MET28YIR017C NUP42P49686 430 aaKnown RBP7.07□□□□□ -1.28
MET28YIR017C MGR2Q02889 113 aa7.07□□□□□ -1.28
MET28YIR017C CUE4Q04201 117 aaPredicted RBP7.07□□□□□ -1.28
MET28YIR017C ERV14P53173 138 aa7.06□□□□□ -1.28
MET28YIR017C UBC5P15732 148 aa7.05□□□□□ -1.28
MET28YIR017C SPC1P46965 94 aa7.05□□□□□ -1.28
MET28YIR017C ERI1P62651 68 aaKnown RBP7.05□□□□□ -1.28
MET28YIR017C TOS6P48560 102 aa7.04□□□□□ -1.28
MET28YIR017C FCF1Q05498 189 aaPredicted RBP7.04□□□□□ -1.28
MET28YIR017C ERG27Q12452 347 aaKnown RBP7.04□□□□□ -1.28
MET28YIR017C YOR008C-AQ3E7B9 74 aa7.04□□□□□ -1.28
MET28YIR017C AQY1P0CD91 305 aa7.03□□□□□ -1.28
MET28YIR017C PRE1P22141 198 aaKnown RBP7.03□□□□□ -1.28
MET28YIR017C PCL2P25693 308 aa7.03□□□□□ -1.28
MET28YIR017C RPR2P40571 144 aa7.03□□□□□ -1.28
MET28YIR017C OST3P48439 350 aa7.03□□□□□ -1.28
MET28YIR017C PKR1Q03880 122 aaKnown RBP7.02□□□□□ -1.29
MET28YIR017C COA6Q3E846 104 aa7.02□□□□□ -1.29
MET28YIR017C MRP49P32388 137 aa7.01□□□□□ -1.29
MET28YIR017C MRPL11P36521 249 aaPredicted RBP7.01□□□□□ -1.29
MET28YIR017C YBR209WP38311 105 aa7.01□□□□□ -1.29
MET28YIR017C ARC15P40518 154 aaRIP-Chip data7.01□□□□□ -1.29not detected
MET28YIR017C URM1P40554 99 aaPredicted RBP7.01□□□□□ -1.29
MET28YIR017C POP3P53833 195 aaPredicted RBP7.01□□□□□ -1.29
MET28YIR017C YMR122W-AQ3E842 84 aa7.01□□□□□ -1.29
MET28YIR017C ADH2P00331 348 aaKnown RBP7□□□□□ -1.29
MET28YIR017C YIL059CP40520 121 aa7□□□□□ -1.29
MET28YIR017C YDR042CQ03205 200 aa7□□□□□ -1.29
MET28YIR017C DPP1Q05521 289 aa7□□□□□ -1.29
MET28YIR017C TRP1P00912 224 aa6.99□□□□□ -1.29
MET28YIR017C RPL16AP26784 199 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms