RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIC1	YHR052W	YIL014C-A	Q02598	104 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	FIT1	Q04433	528 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	YMR103C	Q04436	120 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	SEN15	Q04675	128 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	PCC1	Q3E833	88 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	YOS1	Q3E834	85 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	SUS1	Q6WNK7	96 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	TAR1	Q8TGM6	124 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	OST5	Q92316	86 aa		0.88	□□□□□ -2.27
CIC1	YHR052W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.87	□□□□□ -2.27
CIC1	YHR052W	LYS2	P07702	1392 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	QCR8	P08525	94 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YGL014C-A	P0C5N1	53 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	UBC5	P15732	148 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	EMP24	P32803	203 aa	Known RBP	0.87	□□□□□ -2.27
CIC1	YHR052W	SRX1	P36077	127 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YHR130C	P38834	111 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YHR138C	P38841	114 aa	Predicted RBP	0.87	□□□□□ -2.27
CIC1	YHR052W	GCV3	P39726	170 aa	Predicted RBP	0.87	□□□□□ -2.27
CIC1	YHR052W	EMC5	P40540	141 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YFR035C	P43608	114 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	SED1	Q01589	338 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YOR072W	Q08486	104 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YPR203W	Q08994	102 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YGL041C-B	Q3E750	60 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	COA3	Q3E7B2	85 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	ENV10	Q99382	181 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	DNA2	P38859	1522 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	SWR1	Q05471	1514 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	SSN2	P38931	1420 aa		0.87	□□□□□ -2.27
CIC1	YHR052W	YPK9	Q12697	1472 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	RSF2	P46974	1380 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	RIF1	P29539	1916 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	RPL22A	P05749	121 aa	Known RBP	0.86	□□□□□ -2.27
CIC1	YHR052W	PAU19	P0CE85	124 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	RPL40A	P0CH08	128 aa	Known RBP	0.86	□□□□□ -2.27
CIC1	YHR052W	RPL40B	P0CH09	128 aa	Known RBP	0.86	□□□□□ -2.27
CIC1	YHR052W	PAU3	P25610	124 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	YBR027C	P38220	110 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	CYB5	P40312	120 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	YJL009W	P47078	108 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	MIX14	Q04341	121 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	YMR321C	Q04898	105 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	YLR194C	Q05777	254 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	YDR029W	Q12111	104 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	CMC4	Q3E7A9	73 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	MHF2	Q3E829	80 aa		0.86	□□□□□ -2.27
CIC1	YHR052W	RPA190	P10964	1664 aa	Known RBP	0.85	□□□□□ -2.27
CIC1	YHR052W	ESC1	Q03661	1658 aa	Known RBP	0.85	□□□□□ -2.27
CIC1	YHR052W	RTC6	O14464	93 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	HSP150	P32478	413 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	SNU13	P39990	126 aa	Known RBP	0.85	□□□□□ -2.27
CIC1	YHR052W	RSM19	P53733	91 aa	Predicted RBP	0.85	□□□□□ -2.27
CIC1	YHR052W	SNA2	P56508	79 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	YMR007W	Q03675	126 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	YMR122C	Q03879	124 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	FIT3	Q08907	204 aa		0.85	□□□□□ -2.27
CIC1	YHR052W	ECM12	O13529	151 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	YJL197C-A	P0C5P0	93 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	HMRA2	P0CY13	119 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	UBC4	P15731	148 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	YEL008W	P40001	126 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	YIL102C	P40488	101 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	LST8	P41318	303 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	PAU12	P53343	120 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	AVO2	Q04749	426 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	COA4	Q05809	96 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	LSM6	Q06406	86 aa	Known RBP	0.84	□□□□□ -2.27
CIC1	YHR052W	PRM3	Q08931	133 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	YCL048W-A	Q2V2Q2	79 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	YCR075W-A	Q3E830	75 aa		0.84	□□□□□ -2.27
CIC1	YHR052W	UBR1	P19812	1950 aa		0.84	□□□□□ -2.28
CIC1	YHR052W	YRF1-3	P0CX14	1859 aa		0.84	□□□□□ -2.28
CIC1	YHR052W	YRF1-7	P0CX15	1859 aa		0.84	□□□□□ -2.28
CIC1	YHR052W	YRF1-6	P53819	1859 aa		0.84	□□□□□ -2.28
CIC1	YHR052W	LTE1	P07866	1435 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	YLR419W	Q06698	1435 aa	Known RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	YSF3	P0C074	85 aa	Predicted RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	RPS22A	P0C0W1	130 aa	Known RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	PAU2	P32612	120 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	PAU16	P35994	123 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	COX23	P38824	151 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	YIL163C	P40448	117 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	PAU15	P40585	124 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	MVB12	P42939	101 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	VPS55	P47111	140 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	RPL37A	P49166	88 aa	Known RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	YOL118C	Q08259	102 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	YLR285C-A	Q3E771	56 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	YGR240C-A	Q3E786	66 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	YCR095W-A	Q3E787	52 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	MIC10	Q96VH5	97 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	GSC2	P40989	1895 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	PDR10	P51533	1564 aa		0.83	□□□□□ -2.28
CIC1	YHR052W	ROM2	P51862	1356 aa	Known RBP	0.83	□□□□□ -2.28
CIC1	YHR052W	FAS1	P07149	2051 aa	Known RBP	0.82	□□□□□ -2.28
CIC1	YHR052W	HMRA1	P0CY11	126 aa		0.82	□□□□□ -2.28
CIC1	YHR052W	MRPL31	P14063	131 aa	Predicted RBP	0.82	□□□□□ -2.28
CIC1	YHR052W	YCL042W	P25572	119 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 88.4 ms