RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	SBH1	P52870	82 aa		4.68	□□□□□ -1.66
BUD9	YGR041W	CUE4	Q04201	117 aa	Predicted RBP	4.68	□□□□□ -1.66
BUD9	YGR041W	PIN3	Q06449	215 aa		4.68	□□□□□ -1.66
BUD9	YGR041W	YOR015W	Q12169	119 aa		4.68	□□□□□ -1.66
BUD9	YGR041W	BOL1	Q3E793	110 aa		4.68	□□□□□ -1.66
BUD9	YGR041W	POR1	P04840	283 aa	Known RBP	4.67	□□□□□ -1.66
BUD9	YGR041W	PCL1	P24867	279 aa		4.67	□□□□□ -1.66
BUD9	YGR041W	YEL045C	P32616	141 aa		4.67	□□□□□ -1.66
BUD9	YGR041W	BRR2	P32639	2163 aa	Known RBP	4.67	□□□□□ -1.66
BUD9	YGR041W	SHB17	P36136	271 aa	Known RBP	4.67	□□□□□ -1.66
BUD9	YGR041W	YGR017W	P53210	297 aa		4.67	□□□□□ -1.66
BUD9	YGR041W	ATO3	Q12359	275 aa		4.67	□□□□□ -1.66
BUD9	YGR041W	PAU19	P0CE85	124 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	PAU21	P0CE86	164 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	PAU22	P0CE87	164 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	MRPL44	P19956	98 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	PAU3	P25610	124 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	YHR140W	P38842	239 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	CYT2	Q00873	224 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	HAL1	Q01766	294 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	SEN15	Q04675	128 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	SCW10	Q04951	389 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	FYV12	Q08559	129 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	COA2	Q3E823	68 aa		4.66	□□□□□ -1.66
BUD9	YGR041W	RAD6	P06104	172 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	HSP150	P32478	413 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	CUP9	P41817	306 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	ERG25	P53045	309 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	YMR295C	Q03559	197 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	YLR365W	Q7LIF2	110 aa		4.65	□□□□□ -1.66
BUD9	YGR041W	POL2	P21951	2222 aa	Known RBP	4.65	□□□□□ -1.67
BUD9	YGR041W	CDC39	P25655	2108 aa	Known RBP	4.65	□□□□□ -1.67
BUD9	YGR041W	MID2	P36027	376 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	RPL14A	P36105	138 aa	Known RBP	4.64	□□□□□ -1.67
BUD9	YGR041W	RPL14B	P38754	138 aa	Known RBP	4.64	□□□□□ -1.67
BUD9	YGR041W	CIS3	P47001	227 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU4	P53427	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	YTH1	Q06102	208 aa	Predicted RBP	4.64	□□□□□ -1.67
BUD9	YGR041W	COA6	Q3E846	104 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU1	P0CE88	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU14	P0CE89	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU6	P0CE90	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU18	P0CE91	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU8	P0CE92	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU11	P0CE93	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	MDH2	P22133	377 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PEX4	P29340	183 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	GSP1	P32835	219 aa	Known RBP	4.64	□□□□□ -1.67
BUD9	YGR041W	GSP2	P32836	220 aa	Known RBP	4.64	□□□□□ -1.67
BUD9	YGR041W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
BUD9	YGR041W	PAU13	P38725	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU5	P43575	122 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	BLM10	P43583	2143 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU10	Q03050	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU20	Q08322	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	ATP20	Q12233	115 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	PAU9	Q3E770	120 aa		4.64	□□□□□ -1.67
BUD9	YGR041W	AHT1	P29589	182 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	SRX1	P36077	127 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	HSP10	P38910	106 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	YIL086C	P40503	102 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	AIM11	P87275	137 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	YMR090W	Q04304	227 aa	Known RBP	4.63	□□□□□ -1.67
BUD9	YGR041W	TMC1	Q08422	150 aa	Predicted RBP	4.63	□□□□□ -1.67
BUD9	YGR041W	FSF1	Q12029	327 aa	Known RBP	4.63	□□□□□ -1.67
BUD9	YGR041W	HUT1	Q12520	339 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	YPR108W-A	Q3E7B3	70 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	YNR034W-A	Q3E841	98 aa		4.63	□□□□□ -1.67
BUD9	YGR041W	BEM2	P39960	2167 aa	Known RBP	4.62	□□□□□ -1.67
BUD9	YGR041W	ACC1	Q00955	2233 aa	Known RBP	4.62	□□□□□ -1.67
BUD9	YGR041W	FUN14	P18411	198 aa		4.62	□□□□□ -1.67
BUD9	YGR041W	HSP12	P22943	109 aa	Known RBP	4.62	□□□□□ -1.67
BUD9	YGR041W	RPB7	P34087	171 aa		4.62	□□□□□ -1.67
BUD9	YGR041W	YDR102C	Q03864	110 aa		4.62	□□□□□ -1.67
BUD9	YGR041W	SEC16	P48415	2195 aa	Known RBP	4.62	□□□□□ -1.67
BUD9	YGR041W	COX5B	P00425	151 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	MRPL15	P36523	253 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	SFT1	P43682	97 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	SHH3	Q04487	196 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	FYV7	Q12247	151 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	YIL134C-A	Q45U18	67 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	MPC3	P53311	146 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	HUG1	Q6Q5K6	68 aa		4.61	□□□□□ -1.67
BUD9	YGR041W	UTH1	P36135	365 aa		4.59	□□□□□ -1.67
BUD9	YGR041W	CCS1	P40202	249 aa	Known RBP	4.59	□□□□□ -1.67
BUD9	YGR041W	RRT1	P38192	103 aa		4.58	□□□□□ -1.68
BUD9	YGR041W	YER135C	P40082	130 aa		4.58	□□□□□ -1.68
BUD9	YGR041W	QCR9	P22289	66 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	MRPL11	P36521	249 aa	Predicted RBP	4.57	□□□□□ -1.68
BUD9	YGR041W	YGR269W	P40326	108 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	YIL046W-A	Q3E7Z4	54 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	RPS25B	P0C0T4	108 aa	Known RBP	4.57	□□□□□ -1.68
BUD9	YGR041W	PAM17	P36147	197 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	GEP7	P53171	287 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	YNR064C	P53750	290 aa		4.57	□□□□□ -1.68
BUD9	YGR041W	RPS25A	Q3E792	108 aa	Predicted RBP	4.57	□□□□□ -1.68
BUD9	YGR041W	FLO9	P39712	1322 aa		4.56	□□□□□ -1.68
BUD9	YGR041W	PIR5	P46999	287 aa		4.56	□□□□□ -1.68
BUD9	YGR041W	RCE1	Q03530	315 aa		4.56	□□□□□ -1.68
BUD9	YGR041W	YOL118C	Q08259	102 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms