RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W SFK1P35735 353 aa2.96□□□□□ -1.93
DEG1YFL001W RRT1P38192 103 aa2.96□□□□□ -1.93
DEG1YFL001W TVP18Q04767 167 aa2.96□□□□□ -1.93
DEG1YFL001W YMR320WQ04897 101 aa2.96□□□□□ -1.93
DEG1YFL001W UIP4Q08926 304 aa2.96□□□□□ -1.93
DEG1YFL001W YNL277W-AQ3E7Z0 62 aa2.96□□□□□ -1.93
DEG1YFL001W STT4P37297 1900 aa2.96□□□□□ -1.94
DEG1YFL001W RAD6P06104 172 aa2.95□□□□□ -1.94
DEG1YFL001W ATP5P09457 212 aa2.95□□□□□ -1.94
DEG1YFL001W MDH2P22133 377 aa2.95□□□□□ -1.94
DEG1YFL001W SPT14P32363 452 aa2.95□□□□□ -1.94
DEG1YFL001W RPS27AP35997 82 aaKnown RBP2.95□□□□□ -1.94
DEG1YFL001W NRG2P38082 220 aa2.95□□□□□ -1.94
DEG1YFL001W YBR090CP38253 122 aa2.95□□□□□ -1.94
DEG1YFL001W RPS27BP38711 82 aa2.95□□□□□ -1.94
DEG1YFL001W IGO1P53897 168 aa2.95□□□□□ -1.94
DEG1YFL001W YCL001W-AP87012 153 aa2.95□□□□□ -1.94
DEG1YFL001W ANT1Q06497 328 aa2.95□□□□□ -1.94
DEG1YFL001W YPR174CQ06616 221 aaPredicted RBP2.95□□□□□ -1.94
DEG1YFL001W YIL046W-AQ3E7Z4 54 aa2.95□□□□□ -1.94
DEG1YFL001W HFA1P32874 2273 aa2.95□□□□□ -1.94
DEG1YFL001W BRR2P32639 2163 aaKnown RBP2.94□□□□□ -1.94
DEG1YFL001W RNH202Q05635 350 aa2.94□□□□□ -1.94
DEG1YFL001W YSF3P0C074 85 aaPredicted RBP2.93□□□□□ -1.94
DEG1YFL001W MPM1P40364 252 aa2.93□□□□□ -1.94
DEG1YFL001W FIP1P45976 327 aa2.93□□□□□ -1.94
DEG1YFL001W YGL230CP53074 147 aa2.93□□□□□ -1.94
DEG1YFL001W BUD25P85052 153 aa2.93□□□□□ -1.94
DEG1YFL001W TEL1P38110 2787 aa2.93□□□□□ -1.94
DEG1YFL001W ADK1P07170 222 aaKnown RBP2.93□□□□□ -1.94
DEG1YFL001W YER039C-AP0CD97 72 aa2.93□□□□□ -1.94
DEG1YFL001W SRP21P32342 167 aa2.93□□□□□ -1.94
DEG1YFL001W SHB17P36136 271 aaKnown RBP2.93□□□□□ -1.94
DEG1YFL001W MPC1P53157 130 aaKnown RBP2.93□□□□□ -1.94
DEG1YFL001W UPS1Q05776 175 aa2.93□□□□□ -1.94
DEG1YFL001W SYM1Q06563 197 aa2.93□□□□□ -1.94
DEG1YFL001W SPC3Q12133 184 aa2.93□□□□□ -1.94
DEG1YFL001W YPR013CQ12145 317 aa2.93□□□□□ -1.94
DEG1YFL001W MRPL44P19956 98 aa2.92□□□□□ -1.94
DEG1YFL001W SNU13P39990 126 aaKnown RBP2.92□□□□□ -1.94
DEG1YFL001W GPI2P46961 280 aa2.92□□□□□ -1.94
DEG1YFL001W ERV14P53173 138 aa2.92□□□□□ -1.94
DEG1YFL001W DAD4P69851 72 aa2.92□□□□□ -1.94
DEG1YFL001W NCE101Q02820 53 aa2.92□□□□□ -1.94
DEG1YFL001W YOR381W-AQ3E804 55 aa2.92□□□□□ -1.94
DEG1YFL001W YCR075W-AQ3E830 75 aa2.92□□□□□ -1.94
DEG1YFL001W MHF1Q3E835 90 aa2.92□□□□□ -1.94
DEG1YFL001W YOR032W-AQ8TGS1 66 aa2.92□□□□□ -1.94
DEG1YFL001W GNA1P43577 159 aaPredicted RBP2.91□□□□□ -1.94
DEG1YFL001W GRX5Q02784 150 aa2.91□□□□□ -1.94
DEG1YFL001W YHR086W-AQ3E746 53 aa2.91□□□□□ -1.94
DEG1YFL001W SLH1P53327 1967 aaKnown RBP2.9□□□□□ -1.95
DEG1YFL001W IRA2P19158 3079 aa2.9□□□□□ -1.95
DEG1YFL001W SRB6P32570 121 aa2.9□□□□□ -1.95
DEG1YFL001W TMA19P35691 167 aaKnown RBP2.9□□□□□ -1.95
DEG1YFL001W RPL14BP38754 138 aaKnown RBP2.9□□□□□ -1.95
DEG1YFL001W RPB11P38902 120 aa2.9□□□□□ -1.95
DEG1YFL001W YER181CP40097 107 aa2.9□□□□□ -1.95
DEG1YFL001W SFT1P43682 97 aa2.9□□□□□ -1.95
DEG1YFL001W BAT2P47176 376 aaKnown RBP2.9□□□□□ -1.95
DEG1YFL001W DIE2P50076 525 aa2.9□□□□□ -1.95
DEG1YFL001W COA4Q05809 96 aa2.9□□□□□ -1.95
DEG1YFL001W SCP1Q08873 200 aa2.9□□□□□ -1.95
DEG1YFL001W YOR015WQ12169 119 aa2.9□□□□□ -1.95
DEG1YFL001W FAS1P07149 2051 aaKnown RBP2.89□□□□□ -1.95
DEG1YFL001W YOL162WP0CF19 215 aa2.89□□□□□ -1.95
DEG1YFL001W UBC5P15732 148 aa2.89□□□□□ -1.95
DEG1YFL001W YHL018WP38744 120 aaPredicted RBP2.89□□□□□ -1.95
DEG1YFL001W HTD2P38790 280 aaKnown RBP2.89□□□□□ -1.95
DEG1YFL001W YHR130CP38834 111 aa2.89□□□□□ -1.95
DEG1YFL001W YER135CP40082 130 aa2.89□□□□□ -1.95
DEG1YFL001W THG1P53215 237 aaKnown RBP2.89□□□□□ -1.95
DEG1YFL001W HUT1Q12520 339 aa2.89□□□□□ -1.95
DEG1YFL001W YGL194C-AQ2V2P6 80 aa2.89□□□□□ -1.95
DEG1YFL001W YHR213W-AQ8TGT4 77 aa2.89□□□□□ -1.95
DEG1YFL001W MED11Q99278 115 aa2.89□□□□□ -1.95
DEG1YFL001W YHR214C-DP0CX93 97 aa2.88□□□□□ -1.95
DEG1YFL001W STF2P16965 84 aa2.88□□□□□ -1.95
DEG1YFL001W HSP150P32478 413 aa2.88□□□□□ -1.95
DEG1YFL001W TIM12P32830 109 aa2.88□□□□□ -1.95
DEG1YFL001W YKR045CP36138 183 aa2.88□□□□□ -1.95
DEG1YFL001W YDR102CQ03864 110 aa2.88□□□□□ -1.95
DEG1YFL001W RIM9Q04734 239 aa2.88□□□□□ -1.95
DEG1YFL001W CYR1P08678 2026 aaKnown RBP2.87□□□□□ -1.95
DEG1YFL001W COX8P04039 78 aa2.87□□□□□ -1.95
DEG1YFL001W YFR010W-AP0C5N0 62 aa2.87□□□□□ -1.95
DEG1YFL001W IPT1P38954 527 aa2.87□□□□□ -1.95
DEG1YFL001W RPL13BP40212 199 aaKnown RBP2.87□□□□□ -1.95
DEG1YFL001W YGL193CP53097 103 aa2.87□□□□□ -1.95
DEG1YFL001W YGR164WP53291 111 aa2.87□□□□□ -1.95
DEG1YFL001W KEI1Q06346 221 aa2.87□□□□□ -1.95
DEG1YFL001W IRC19Q07843 230 aa2.87□□□□□ -1.95
DEG1YFL001W GCN1P33892 2672 aaKnown RBP2.87□□□□□ -1.95
DEG1YFL001W CSF1Q12150 2958 aa2.86□□□□□ -1.95
DEG1YFL001W COX5BP00425 151 aa2.86□□□□□ -1.95
DEG1YFL001W YRA2P36036 203 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
DEG1YFL001W YHR140WP38842 239 aa2.86□□□□□ -1.95
DEG1YFL001W LIP1Q03579 150 aa2.86□□□□□ -1.95
DEG1YFL001W MIX14Q04341 121 aa2.86□□□□□ -1.95
DEG1YFL001W ELP6Q04868 273 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms