RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C EMP24P32803 203 aaKnown RBP0.55□□□□□ -2.32
RTR1YER139C LHP1P33399 275 aaKnown RBP0.55□□□□□ -2.32
RTR1YER139C UTP11P34247 250 aaPredicted RBP0.55□□□□□ -2.32
RTR1YER139C YBR090CP38253 122 aa0.55□□□□□ -2.32
RTR1YER139C TRS20P38334 175 aa0.55□□□□□ -2.32
RTR1YER139C SNF11P38956 169 aa0.55□□□□□ -2.32
RTR1YER139C POR2P40478 281 aa0.55□□□□□ -2.32
RTR1YER139C VMA21P41806 77 aa0.55□□□□□ -2.32
RTR1YER139C PAM16P42949 149 aa0.55□□□□□ -2.32
RTR1YER139C RPL22BP56628 122 aaKnown RBP0.55□□□□□ -2.32
RTR1YER139C SEN15Q04675 128 aa0.55□□□□□ -2.32
RTR1YER139C HPA2Q06592 156 aa0.55□□□□□ -2.32
RTR1YER139C CCW12Q12127 133 aa0.55□□□□□ -2.32
RTR1YER139C OCA6Q12454 224 aa0.55□□□□□ -2.32
RTR1YER139C YCL048W-AQ2V2Q2 79 aa0.55□□□□□ -2.32
RTR1YER139C YHR213W-BQ8TGK1 99 aa0.55□□□□□ -2.32
RTR1YER139C HFA1P32874 2273 aa0.55□□□□□ -2.32
RTR1YER139C ROM2P51862 1356 aaKnown RBP0.55□□□□□ -2.32
RTR1YER139C YPK9Q12697 1472 aa0.54□□□□□ -2.32
RTR1YER139C YOL013W-AP0C272 63 aaPredicted RBP0.54□□□□□ -2.32
RTR1YER139C UBC5P15732 148 aa0.54□□□□□ -2.32
RTR1YER139C TDA2P40045 126 aa0.54□□□□□ -2.32
RTR1YER139C YER187WP40102 141 aa0.54□□□□□ -2.32
RTR1YER139C YIR020CP40575 100 aa0.54□□□□□ -2.32
RTR1YER139C GNA1P43577 159 aaPredicted RBP0.54□□□□□ -2.32
RTR1YER139C HUR1P45820 110 aa0.54□□□□□ -2.32
RTR1YER139C RPS12P48589 143 aaKnown RBP0.54□□□□□ -2.32
RTR1YER139C YLR042CQ07990 161 aa0.54□□□□□ -2.32
RTR1YER139C PRM3Q08931 133 aa0.54□□□□□ -2.32
RTR1YER139C DAD1Q12248 94 aa0.54□□□□□ -2.32
RTR1YER139C YGL041C-BQ3E750 60 aa0.54□□□□□ -2.32
RTR1YER139C YOS1Q3E834 85 aa0.54□□□□□ -2.32
RTR1YER139C RPL22AP05749 121 aaKnown RBP0.53□□□□□ -2.32
RTR1YER139C RPL40AP0CH08 128 aaKnown RBP0.53□□□□□ -2.32
RTR1YER139C RPL40BP0CH09 128 aaKnown RBP0.53□□□□□ -2.32
RTR1YER139C MRPL31P14063 131 aaPredicted RBP0.53□□□□□ -2.32
RTR1YER139C YAR029WP39549 74 aa0.53□□□□□ -2.32
RTR1YER139C YIL163CP40448 117 aa0.53□□□□□ -2.32
RTR1YER139C SNN1P48232 102 aa0.53□□□□□ -2.32
RTR1YER139C RUB1Q03919 77 aa0.53□□□□□ -2.32
RTR1YER139C YLR194CQ05777 254 aa0.53□□□□□ -2.32
RTR1YER139C YLR363W-AQ3E747 85 aa0.53□□□□□ -2.32
RTR1YER139C YOR376W-AQ3E805 51 aa0.53□□□□□ -2.32
RTR1YER139C GEA1P47102 1408 aaPredicted RBP0.53□□□□□ -2.32
RTR1YER139C BUD4P47136 1447 aa0.53□□□□□ -2.32
RTR1YER139C CDC39P25655 2108 aaKnown RBP0.52□□□□□ -2.33
RTR1YER139C SRX1P36077 127 aa0.52□□□□□ -2.33
RTR1YER139C MIC27P50945 234 aa0.52□□□□□ -2.33
RTR1YER139C YMR090WQ04304 227 aaKnown RBP0.52□□□□□ -2.33
RTR1YER139C YGR240C-AQ3E786 66 aa0.52□□□□□ -2.33
RTR1YER139C PCC1Q3E833 88 aa0.52□□□□□ -2.33
RTR1YER139C UBC4P15731 148 aa0.51□□□□□ -2.33
RTR1YER139C YBR013CP38215 129 aa0.51□□□□□ -2.33
RTR1YER139C YEA6P39953 335 aa0.51□□□□□ -2.33
RTR1YER139C MIX14Q04341 121 aa0.51□□□□□ -2.33
RTR1YER139C YMR103CQ04436 120 aa0.51□□□□□ -2.33
RTR1YER139C YMR321CQ04898 105 aa0.51□□□□□ -2.33
RTR1YER139C YLR419WQ06698 1435 aaKnown RBP0.51□□□□□ -2.33
RTR1YER139C HUG1Q6Q5K6 68 aa0.51□□□□□ -2.33
RTR1YER139C GEA2P39993 1459 aaKnown RBP0.5□□□□□ -2.33
RTR1YER139C YCR101CP25607 182 aa0.5□□□□□ -2.33
RTR1YER139C COX23P38824 151 aa0.5□□□□□ -2.33
RTR1YER139C YHR130CP38834 111 aa0.5□□□□□ -2.33
RTR1YER139C YER137CP40083 148 aaKnown RBP0.5□□□□□ -2.33
RTR1YER139C YMR141CP40211 102 aa0.5□□□□□ -2.33
RTR1YER139C VPS55P47111 140 aa0.5□□□□□ -2.33
RTR1YER139C PAU12P53343 120 aa0.5□□□□□ -2.33
RTR1YER139C FYV7Q12247 151 aa0.5□□□□□ -2.33
RTR1YER139C COX19Q3E731 98 aa0.5□□□□□ -2.33
RTR1YER139C PRP8P33334 2413 aaKnown RBP0.49□□□□□ -2.33
RTR1YER139C TY3B-IQ7LHG5 1498 aaKnown RBP0.49□□□□□ -2.33
RTR1YER139C LYS2P07702 1392 aa0.49□□□□□ -2.33
RTR1YER139C KRE5P22023 1365 aa0.49□□□□□ -2.33
RTR1YER139C CCW14O13547 238 aa0.49□□□□□ -2.33
RTR1YER139C ADK1P07170 222 aaKnown RBP0.49□□□□□ -2.33
RTR1YER139C AIM4P38305 123 aaPredicted RBP0.49□□□□□ -2.33
RTR1YER139C YHR138CP38841 114 aaPredicted RBP0.49□□□□□ -2.33
RTR1YER139C HHY1P39982 102 aa0.49□□□□□ -2.33
RTR1YER139C MVB12P42939 101 aa0.49□□□□□ -2.33
RTR1YER139C YOR289WQ12012 251 aaPredicted RBP0.49□□□□□ -2.33
RTR1YER139C ENV10Q99382 181 aa0.49□□□□□ -2.33
RTR1YER139C TOP2P06786 1428 aaKnown RBP0.48□□□□□ -2.33
RTR1YER139C CAT8P39113 1433 aa0.48□□□□□ -2.33
RTR1YER139C SRB6P32570 121 aa0.48□□□□□ -2.33
RTR1YER139C YHL005CP38752 130 aa0.48□□□□□ -2.33
RTR1YER139C YJR128WP47162 119 aa0.48□□□□□ -2.33
RTR1YER139C YOL118CQ08259 102 aa0.48□□□□□ -2.33
RTR1YER139C YLR285C-AQ3E771 56 aa0.48□□□□□ -2.33
RTR1YER139C MIC10Q96VH5 97 aa0.48□□□□□ -2.33
RTR1YER139C REV3P14284 1504 aa0.48□□□□□ -2.33
RTR1YER139C RIF1P29539 1916 aa0.47□□□□□ -2.33
RTR1YER139C PAU19P0CE85 124 aa0.47□□□□□ -2.33
RTR1YER139C PAU3P25610 124 aa0.47□□□□□ -2.33
RTR1YER139C PAU2P32612 120 aa0.47□□□□□ -2.33
RTR1YER139C PAU24P38155 120 aa0.47□□□□□ -2.33
RTR1YER139C CYB5P40312 120 aa0.47□□□□□ -2.33
RTR1YER139C RSM19P53733 91 aaPredicted RBP0.47□□□□□ -2.33
RTR1YER139C COX12Q01519 83 aa0.47□□□□□ -2.33
RTR1YER139C LSM6Q06406 86 aaKnown RBP0.47□□□□□ -2.33
RTR1YER139C YPL225WQ08971 146 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms