RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C YKL044WP36092 106 aa4.55□□□□□ -1.68
SHO1YER118C SNF11P38956 169 aa4.55□□□□□ -1.68
SHO1YER118C TDA2P40045 126 aa4.55□□□□□ -1.68
SHO1YER118C YGR269WP40326 108 aa4.55□□□□□ -1.68
SHO1YER118C RAD28Q12021 506 aa4.55□□□□□ -1.68
SHO1YER118C FYV5P25585 152 aa4.54□□□□□ -1.68
SHO1YER118C KNH1P50112 268 aa4.54□□□□□ -1.68
SHO1YER118C YPR195CQ06594 109 aa4.54□□□□□ -1.68
SHO1YER118C SCP1Q08873 200 aa4.54□□□□□ -1.68
SHO1YER118C MSB2P32334 1306 aa4.53□□□□□ -1.68
SHO1YER118C PRE1P22141 198 aaKnown RBP4.53□□□□□ -1.68
SHO1YER118C ERV14P53173 138 aa4.53□□□□□ -1.68
SHO1YER118C YMR090WQ04304 227 aaKnown RBP4.53□□□□□ -1.68
SHO1YER118C NMA1Q06178 401 aaKnown RBP4.53□□□□□ -1.68
SHO1YER118C SEC11P15367 167 aa4.52□□□□□ -1.69
SHO1YER118C YGL194C-AQ2V2P6 80 aa4.52□□□□□ -1.69
SHO1YER118C UBR1P19812 1950 aa4.52□□□□□ -1.69
SHO1YER118C DNF3Q12674 1656 aa4.51□□□□□ -1.69
SHO1YER118C MRPL44P19956 98 aa4.51□□□□□ -1.69
SHO1YER118C KRE1P17260 313 aa4.5□□□□□ -1.69
SHO1YER118C YHL018WP38744 120 aaPredicted RBP4.5□□□□□ -1.69
SHO1YER118C DAD4P69851 72 aa4.5□□□□□ -1.69
SHO1YER118C YLR422WQ06409 1932 aa4.49□□□□□ -1.69
SHO1YER118C PEX4P29340 183 aa4.49□□□□□ -1.69
SHO1YER118C EMP24P32803 203 aaKnown RBP4.49□□□□□ -1.69
SHO1YER118C PHO88P38264 188 aaPredicted RBP4.49□□□□□ -1.69
SHO1YER118C YHR130CP38834 111 aa4.49□□□□□ -1.69
SHO1YER118C SVP26P38869 228 aa4.49□□□□□ -1.69
SHO1YER118C YJR146WP47174 117 aa4.49□□□□□ -1.69
SHO1YER118C GPI19Q04082 140 aa4.49□□□□□ -1.69
SHO1YER118C FIT1Q04433 528 aa4.49□□□□□ -1.69
SHO1YER118C COX8P04039 78 aa4.48□□□□□ -1.69
SHO1YER118C YLR365WQ7LIF2 110 aa4.48□□□□□ -1.69
SHO1YER118C SNU13P39990 126 aaKnown RBP4.47□□□□□ -1.69
SHO1YER118C POP3P53833 195 aaPredicted RBP4.47□□□□□ -1.69
SHO1YER118C YDL157CQ12082 118 aa4.47□□□□□ -1.69
SHO1YER118C RSF2P46974 1380 aa4.46□□□□□ -1.7
SHO1YER118C YGL010WP25338 174 aa4.46□□□□□ -1.7
SHO1YER118C LYS2P07702 1392 aa4.45□□□□□ -1.7
SHO1YER118C ECM31P38122 312 aa4.45□□□□□ -1.7
SHO1YER118C YPR153WQ06537 140 aa4.45□□□□□ -1.7
SHO1YER118C VPS68Q12016 184 aa4.45□□□□□ -1.7
SHO1YER118C TY1B-NL2Q99337 1749 aaKnown RBP4.44□□□□□ -1.7
SHO1YER118C MLP1Q02455 1875 aaKnown RBP4.44□□□□□ -1.7
SHO1YER118C UBC4P15731 148 aa4.44□□□□□ -1.7
SHO1YER118C STF2P16965 84 aa4.44□□□□□ -1.7
SHO1YER118C HSP10P38910 106 aa4.44□□□□□ -1.7
SHO1YER118C HPA3P39979 161 aa4.44□□□□□ -1.7
SHO1YER118C RDS3Q06835 107 aaPredicted RBP4.44□□□□□ -1.7
SHO1YER118C FIT2Q08906 153 aa4.44□□□□□ -1.7
SHO1YER118C MIC10Q96VH5 97 aa4.44□□□□□ -1.7
SHO1YER118C RPS25BP0C0T4 108 aaKnown RBP4.43□□□□□ -1.7
SHO1YER118C PAU21P0CE86 164 aa4.43□□□□□ -1.7
SHO1YER118C PAU22P0CE87 164 aa4.43□□□□□ -1.7
SHO1YER118C NAT5Q08689 176 aa4.43□□□□□ -1.7
SHO1YER118C YMR030W-AQ3E760 96 aa4.43□□□□□ -1.7
SHO1YER118C RPS25AQ3E792 108 aaPredicted RBP4.43□□□□□ -1.7
SHO1YER118C KSH1Q8TGJ3 72 aa4.43□□□□□ -1.7
SHO1YER118C AGA2P32781 87 aa4.42□□□□□ -1.7
SHO1YER118C ELP6Q04868 273 aa4.42□□□□□ -1.7
SHO1YER118C SPO73P40031 143 aa4.41□□□□□ -1.7
SHO1YER118C GTT1P40582 234 aa4.41□□□□□ -1.7
SHO1YER118C DCV1P43595 202 aa4.41□□□□□ -1.7
SHO1YER118C YGL149WP53116 101 aa4.41□□□□□ -1.7
SHO1YER118C YOS1Q3E834 85 aa4.41□□□□□ -1.7
SHO1YER118C MDM35O60200 86 aa4.4□□□□□ -1.71
SHO1YER118C FUN14P18411 198 aa4.4□□□□□ -1.71
SHO1YER118C UTR5P32630 166 aa4.4□□□□□ -1.71
SHO1YER118C MRPL11P36521 249 aaPredicted RBP4.4□□□□□ -1.71
SHO1YER118C COA6Q3E846 104 aa4.4□□□□□ -1.71
SHO1YER118C YHR022CP38763 256 aa4.39□□□□□ -1.71
SHO1YER118C BRP1P53194 125 aa4.39□□□□□ -1.71
SHO1YER118C IGO1P53897 168 aa4.39□□□□□ -1.71
SHO1YER118C SWC7Q06707 132 aa4.39□□□□□ -1.71
SHO1YER118C FIT3Q08907 204 aa4.39□□□□□ -1.71
SHO1YER118C YRF1-3P0CX14 1859 aa4.39□□□□□ -1.71
SHO1YER118C YRF1-7P0CX15 1859 aa4.39□□□□□ -1.71
SHO1YER118C YRF1-6P53819 1859 aa4.39□□□□□ -1.71
SHO1YER118C YER187WP40102 141 aa4.38□□□□□ -1.71
SHO1YER118C YJL144WP47009 104 aa4.38□□□□□ -1.71
SHO1YER118C YDR029WQ12111 104 aa4.38□□□□□ -1.71
SHO1YER118C RPL40AP0CH08 128 aaKnown RBP4.37□□□□□ -1.71
SHO1YER118C RPL40BP0CH09 128 aaKnown RBP4.37□□□□□ -1.71
SHO1YER118C HYR1P40581 163 aaKnown RBP4.37□□□□□ -1.71
SHO1YER118C HUR1P45820 110 aa4.37□□□□□ -1.71
SHO1YER118C CYT2Q00873 224 aa4.37□□□□□ -1.71
SHO1YER118C YPL261CQ08976 102 aa4.37□□□□□ -1.71
SHO1YER118C EMC6Q12431 108 aa4.37□□□□□ -1.71
SHO1YER118C CMC4Q3E7A9 73 aa4.37□□□□□ -1.71
SHO1YER118C YFL051CP43552 160 aa4.36□□□□□ -1.71
SHO1YER118C DAD1Q12248 94 aa4.36□□□□□ -1.71
SHO1YER118C USO1P25386 1790 aa4.35□□□□□ -1.71
SHO1YER118C IPT1P38954 527 aa4.35□□□□□ -1.71
SHO1YER118C YEL014CP39999 101 aa4.35□□□□□ -1.71
SHO1YER118C PEP8P40335 379 aa4.35□□□□□ -1.71
SHO1YER118C PAU12P53343 120 aa4.35□□□□□ -1.71
SHO1YER118C YPL067CQ02754 198 aa4.35□□□□□ -1.71
SHO1YER118C GPI11Q06636 219 aa4.35□□□□□ -1.71
SHO1YER118C VMA21P41806 77 aa4.34□□□□□ -1.71
SHO1YER118C SNF2P22082 1703 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms