RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	YIL086C	P40503	102 aa		4.01	□□□□□ -1.77
PAL1	YDR348C	DUO1	P53168	247 aa	Known RBP	4.01	□□□□□ -1.77
PAL1	YDR348C	MST27	P53176	234 aa		4.01	□□□□□ -1.77
PAL1	YDR348C	MGR2	Q02889	113 aa		4.01	□□□□□ -1.77
PAL1	YDR348C	YDR114C	Q04597	100 aa		4.01	□□□□□ -1.77
PAL1	YDR348C	YFL041W-A	Q3E817	63 aa		4.01	□□□□□ -1.77
PAL1	YDR348C	RPL27A	P0C2H6	136 aa	Known RBP	4	□□□□□ -1.77
PAL1	YDR348C	YBL071C	P38185	102 aa		4	□□□□□ -1.77
PAL1	YDR348C	VTC1	P40046	129 aa	RIP-Chip data	4	□□□□□ -1.77	not detected
PAL1	YDR348C	YER121W	P40076	114 aa		4	□□□□□ -1.77
PAL1	YDR348C	YDL186W	P48568	277 aa		4	□□□□□ -1.77
PAL1	YDR348C	HST4	P53688	370 aa		4	□□□□□ -1.77
PAL1	YDR348C	SDC1	Q03323	175 aa		4	□□□□□ -1.77
PAL1	YDR348C	GPI19	Q04082	140 aa		4	□□□□□ -1.77
PAL1	YDR348C	MIX14	Q04341	121 aa		4	□□□□□ -1.77
PAL1	YDR348C	YDR119W-A	Q2V2P9	66 aa		4	□□□□□ -1.77
PAL1	YDR348C	RPS14A	P06367	137 aa	Known RBP	4	□□□□□ -1.77
PAL1	YDR348C	HMRA2	P0CY13	119 aa		4	□□□□□ -1.77
PAL1	YDR348C	RPS14B	P39516	138 aa	Known RBP	4	□□□□□ -1.77
PAL1	YDR348C	FIP1	P45976	327 aa		4	□□□□□ -1.77
PAL1	YDR348C	YMR317W	Q04893	1140 aa		4	□□□□□ -1.77
PAL1	YDR348C	FCF1	Q05498	189 aa	Predicted RBP	4	□□□□□ -1.77
PAL1	YDR348C	ENV10	Q99382	181 aa		4	□□□□□ -1.77
PAL1	YDR348C	RAD6	P06104	172 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	DSE2	P38844	325 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	YIL059C	P40520	121 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	GON7	P46984	123 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	ATP23	P53722	227 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	SWS2	P53937	143 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	ABF2	Q02486	183 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	RRG8	Q06109	277 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	RRS1	Q08746	203 aa	Known RBP	3.99	□□□□□ -1.77
PAL1	YDR348C	YOR376W	Q08900	122 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	TIM22	Q12328	207 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	COA3	Q3E7B2	85 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	YIL046W-A	Q3E7Z4	54 aa		3.99	□□□□□ -1.77
PAL1	YDR348C	PFY1	P07274	126 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	YCR085W	P25650	117 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	VMA11	P32842	164 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	TIR2	P33890	251 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	YNL217W	P40152	326 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	VHS2	P40463	436 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	VPS55	P47111	140 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	UBC11	P52492	156 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	YIP1	P53039	248 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	IGO2	Q9P305	131 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	BLM10	P43583	2143 aa		3.98	□□□□□ -1.77
PAL1	YDR348C	YER039C-A	P0CD97	72 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	YCR006C	P25350	157 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	AGA1	P32323	725 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	MID2	P36027	376 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	YHR140W	P38842	239 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	MBB1	P39534	108 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	MRPL49	P40858	161 aa	Predicted RBP	3.97	□□□□□ -1.77
PAL1	YDR348C	SKI6	P46948	246 aa	Predicted RBP	3.97	□□□□□ -1.77
PAL1	YDR348C	LCB3	P47013	409 aa		3.97	□□□□□ -1.77
PAL1	YDR348C	YTH1	Q06102	208 aa	Predicted RBP	3.97	□□□□□ -1.77
PAL1	YDR348C	SEC16	P48415	2195 aa	Known RBP	3.97	□□□□□ -1.77
PAL1	YDR348C	Q0255	P03881	472 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	YER085C	P40058	173 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	YFL051C	P43552	160 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	KNH1	P50112	268 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	SBH2	P52871	88 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	COX12	Q01519	83 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	YLR342W-A	Q3E810	57 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	YCL021W-A	Q96VH3	125 aa		3.96	□□□□□ -1.78
PAL1	YDR348C	YHR139C-A	O13536	103 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YHR213W	P0CI67	198 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	RPS8A	P0CX39	200 aa	Known RBP	3.95	□□□□□ -1.78
PAL1	YDR348C	RPS8B	P0CX40	200 aa	Known RBP	3.95	□□□□□ -1.78
PAL1	YDR348C	BET2	P20133	325 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YIA6	P40556	373 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YFL015C	P43578	164 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	TOS6	P48560	102 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YMR181C	Q03231	154 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	ECM12	O13529	151 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	INO2	P26798	304 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	MTC6	P38849	526 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YER084W	P40057	128 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	IMP2	P46972	177 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	BNA1	P47096	177 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	CAX4	P53223	239 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	AIM11	P87275	137 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	COF1	Q03048	143 aa	Known RBP	3.95	□□□□□ -1.78
PAL1	YDR348C	AIM34	Q03673	198 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YLR194C	Q05777	254 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	YDR029W	Q12111	104 aa		3.95	□□□□□ -1.78
PAL1	YDR348C	BRR2	P32639	2163 aa	Known RBP	3.95	□□□□□ -1.78
PAL1	YDR348C	TOM1	Q03280	3268 aa		3.94	□□□□□ -1.78
PAL1	YDR348C	ACC1	Q00955	2233 aa	Known RBP	3.94	□□□□□ -1.78
PAL1	YDR348C	YKL097C	P34245	136 aa		3.94	□□□□□ -1.78
PAL1	YDR348C	SMP1	P38128	452 aa		3.94	□□□□□ -1.78
PAL1	YDR348C	PRM7	Q12459	698 aa		3.94	□□□□□ -1.78
PAL1	YDR348C	UBC5	P15732	148 aa		3.93	□□□□□ -1.78
PAL1	YDR348C	KTI12	P34253	313 aa	Known RBP	3.93	□□□□□ -1.78
PAL1	YDR348C	GLE2	P40066	365 aa		3.93	□□□□□ -1.78
PAL1	YDR348C	SPI1	P40092	148 aa		3.93	□□□□□ -1.78
PAL1	YDR348C	PIR5	P46999	287 aa		3.93	□□□□□ -1.78
PAL1	YDR348C	MRPL19	P53875	158 aa		3.93	□□□□□ -1.78
PAL1	YDR348C	YOR029W	Q12243	111 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms