RNA–Protein interactions for RNA: YDR322W

MRPL35, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL35, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL35	YDR322W	YBR298C-A	Q8TGK4	73 aa		4.66	□□□□□ -1.66
MRPL35	YDR322W	YPR010C-A	A5Z2X5	72 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	MRP49	P32388	137 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	YBR090C	P38253	122 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	YHR140W	P38842	239 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	TEM1	P38987	245 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	FMP16	Q12497	93 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	VMA9	Q3E7B6	73 aa		4.65	□□□□□ -1.67
MRPL35	YDR322W	FMP49	A0A023PZB3	126 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	RPL27A	P0C2H6	136 aa	Known RBP	4.64	□□□□□ -1.67
MRPL35	YDR322W	HMRA1	P0CY11	126 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	ANB1	P19211	157 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	SMT3	Q12306	101 aa	Known RBP	4.64	□□□□□ -1.67
MRPL35	YDR322W	ATP14	Q12349	124 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	DCN1	Q12395	269 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	Q0142	Q9ZZW4	58 aa		4.64	□□□□□ -1.67
MRPL35	YDR322W	YBR013C	P38215	129 aa		4.63	□□□□□ -1.67
MRPL35	YDR322W	BNS1	P50084	137 aa		4.63	□□□□□ -1.67
MRPL35	YDR322W	GPI19	Q04082	140 aa		4.63	□□□□□ -1.67
MRPL35	YDR322W	YDR115W	Q04598	105 aa		4.63	□□□□□ -1.67
MRPL35	YDR322W	FRS1	P15624	595 aa	Known RBP	4.62	□□□□□ -1.67
MRPL35	YDR322W	LAC1	P28496	418 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	RPB11	P38902	120 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	DAD3	P69850	94 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	PMP3	P87284	55 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	LCL2	Q08045	131 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	YCL001W-B	Q96VH2	84 aa		4.62	□□□□□ -1.67
MRPL35	YDR322W	RPL42A	P0CX27	106 aa	Known RBP	4.61	□□□□□ -1.67
MRPL35	YDR322W	RPL42B	P0CX28	106 aa	Known RBP	4.61	□□□□□ -1.67
MRPL35	YDR322W	MRPS9	P38120	278 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	MIX23	P38162	196 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	HSP10	P38910	106 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	PAU7	P39545	55 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	YIL024C	P40543	189 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	PAU5	P43575	122 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	CSM4	Q08955	156 aa		4.61	□□□□□ -1.67
MRPL35	YDR322W	YLR415C	O13578	112 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	SRB6	P32570	121 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	VMA7	P39111	118 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	ERG28	P40030	148 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	HIT1	P46973	164 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	NAT3	Q06504	195 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	YLR118C	Q12354	227 aa		4.6	□□□□□ -1.67
MRPL35	YDR322W	ZRT1	P32804	376 aa		4.59	□□□□□ -1.67
MRPL35	YDR322W	TVP18	Q04767	167 aa		4.59	□□□□□ -1.67
MRPL35	YDR322W	YOP1	Q12402	180 aa		4.59	□□□□□ -1.67
MRPL35	YDR322W	YGR149W	P48236	432 aa		4.58	□□□□□ -1.68
MRPL35	YDR322W	THG1	P53215	237 aa	Known RBP	4.58	□□□□□ -1.68
MRPL35	YDR322W	SNU23	Q12368	194 aa	Predicted RBP	4.58	□□□□□ -1.68
MRPL35	YDR322W	NHP6A	P11632	93 aa	Known RBP	4.57	□□□□□ -1.68
MRPL35	YDR322W	ARC15	P40518	154 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
MRPL35	YDR322W	APS2	Q00381	147 aa		4.57	□□□□□ -1.68
MRPL35	YDR322W	YMR320W	Q04897	101 aa		4.57	□□□□□ -1.68
MRPL35	YDR322W	DXO1	Q06349	442 aa		4.57	□□□□□ -1.68
MRPL35	YDR322W	GTO3	Q04806	366 aa		4.56	□□□□□ -1.68
MRPL35	YDR322W	POM33	Q12164	279 aa		4.56	□□□□□ -1.68
MRPL35	YDR322W	DFM1	Q12743	341 aa	Known RBP	4.56	□□□□□ -1.68
MRPL35	YDR322W	ADH3	P07246	375 aa	Known RBP	4.55	□□□□□ -1.68
MRPL35	YDR322W	PCL2	P25693	308 aa		4.55	□□□□□ -1.68
MRPL35	YDR322W	DCV1	P43595	202 aa		4.55	□□□□□ -1.68
MRPL35	YDR322W	DAN1	P47178	298 aa		4.55	□□□□□ -1.68
MRPL35	YDR322W	YDR034C-A	P0C289	58 aa		4.54	□□□□□ -1.68
MRPL35	YDR322W	RPL16A	P26784	199 aa	Known RBP	4.54	□□□□□ -1.68
MRPL35	YDR322W	YIL059C	P40520	121 aa		4.54	□□□□□ -1.68
MRPL35	YDR322W	YGR017W	P53210	297 aa		4.54	□□□□□ -1.68
MRPL35	YDR322W	RRT15	Q3E811	62 aa		4.54	□□□□□ -1.68
MRPL35	YDR322W	NTF2	P33331	125 aa	Known RBP	4.53	□□□□□ -1.68
MRPL35	YDR322W	SDH8	P38345	138 aa		4.53	□□□□□ -1.68
MRPL35	YDR322W	SVP26	P38869	228 aa		4.53	□□□□□ -1.68
MRPL35	YDR322W	PAU15	P40585	124 aa		4.53	□□□□□ -1.68
MRPL35	YDR322W	YNR034W-A	Q3E841	98 aa		4.53	□□□□□ -1.68
MRPL35	YDR322W	YKR032W	P36127	104 aa		4.52	□□□□□ -1.69
MRPL35	YDR322W	YKR070W	P36151	352 aa	Known RBP	4.52	□□□□□ -1.69
MRPL35	YDR322W	YER076C	P40049	302 aa		4.52	□□□□□ -1.69
MRPL35	YDR322W	RPC10	P40422	70 aa		4.52	□□□□□ -1.69
MRPL35	YDR322W	YAR023C	D6VPM8	179 aa		4.51	□□□□□ -1.69
MRPL35	YDR322W	YGL010W	P25338	174 aa		4.51	□□□□□ -1.69
MRPL35	YDR322W	MGR2	Q02889	113 aa		4.51	□□□□□ -1.69
MRPL35	YDR322W	FCF1	Q05498	189 aa	Predicted RBP	4.51	□□□□□ -1.69
MRPL35	YDR322W	YLR194C	Q05777	254 aa		4.51	□□□□□ -1.69
MRPL35	YDR322W	ERG27	Q12452	347 aa	Known RBP	4.51	□□□□□ -1.69
MRPL35	YDR322W	TRP1	P00912	224 aa		4.5	□□□□□ -1.69
MRPL35	YDR322W	PFY1	P07274	126 aa		4.5	□□□□□ -1.69
MRPL35	YDR322W	RPL23A	P0CX41	137 aa	Known RBP	4.49	□□□□□ -1.69
MRPL35	YDR322W	RPL23B	P0CX42	137 aa	Known RBP	4.49	□□□□□ -1.69
MRPL35	YDR322W	PAM17	P36147	197 aa		4.49	□□□□□ -1.69
MRPL35	YDR322W	YAR029W	P39549	74 aa		4.49	□□□□□ -1.69
MRPL35	YDR322W	YJR146W	P47174	117 aa		4.49	□□□□□ -1.69
MRPL35	YDR322W	FSF1	Q12029	327 aa	Known RBP	4.49	□□□□□ -1.69
MRPL35	YDR322W	SEC72	P39742	193 aa	Known RBP	4.48	□□□□□ -1.69
MRPL35	YDR322W	TOS6	P48560	102 aa		4.48	□□□□□ -1.69
MRPL35	YDR322W	GLO1	P50107	326 aa		4.48	□□□□□ -1.69
MRPL35	YDR322W	SDS23	P53172	527 aa		4.48	□□□□□ -1.69
MRPL35	YDR322W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.48	□□□□□ -1.69
MRPL35	YDR322W	ENV10	Q99382	181 aa		4.48	□□□□□ -1.69
MRPL35	YDR322W	PET8	P38921	284 aa		4.47	□□□□□ -1.69
MRPL35	YDR322W	UBC11	P52492	156 aa		4.47	□□□□□ -1.69
MRPL35	YDR322W	CNB1	P25296	175 aa		4.46	□□□□□ -1.7
MRPL35	YDR322W	ATG8	P38182	117 aa	RIP-Chip data	4.46	□□□□□ -1.7	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms