RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YPR064WQ12492 139 aa3.42□□□□□ -1.86
TRS85YDR108W YBR255C-AQ3E776 120 aa3.42□□□□□ -1.86
TRS85YDR108W Q0255P03881 472 aa3.42□□□□□ -1.86
TRS85YDR108W CSH1P38287 376 aa3.42□□□□□ -1.86
TRS85YDR108W MBB1P39534 108 aa3.42□□□□□ -1.86
TRS85YDR108W YLR281CQ05863 155 aa3.42□□□□□ -1.86
TRS85YDR108W GAT3Q07928 141 aa3.42□□□□□ -1.86
TRS85YDR108W HUG1Q6Q5K6 68 aa3.42□□□□□ -1.86
TRS85YDR108W AQY1P0CD91 305 aa3.41□□□□□ -1.86
TRS85YDR108W PCL5P38794 229 aa3.41□□□□□ -1.86
TRS85YDR108W TIM17P39515 158 aa3.41□□□□□ -1.86
TRS85YDR108W YDR209CQ03480 137 aa3.41□□□□□ -1.86
TRS85YDR108W ROT1Q03691 256 aa3.41□□□□□ -1.86
TRS85YDR108W YOL029CQ08187 201 aa3.41□□□□□ -1.86
TRS85YDR108W YMR175W-AQ3E766 64 aa3.41□□□□□ -1.86
TRS85YDR108W YLR365WQ7LIF2 110 aa3.41□□□□□ -1.86
TRS85YDR108W TDA7P53882 636 aaPredicted RBP3.4□□□□□ -1.86
TRS85YDR108W ATP19P81451 68 aa3.4□□□□□ -1.86
TRS85YDR108W RLM1Q12224 676 aa3.4□□□□□ -1.86
TRS85YDR108W MRPL31P14063 131 aaPredicted RBP3.4□□□□□ -1.87
TRS85YDR108W BET1P22804 142 aa3.4□□□□□ -1.87
TRS85YDR108W FPR2P32472 135 aa3.4□□□□□ -1.87
TRS85YDR108W YGR050CP53231 118 aa3.4□□□□□ -1.87
TRS85YDR108W PET191Q02772 108 aa3.4□□□□□ -1.87
TRS85YDR108W ROX3P25046 220 aa3.39□□□□□ -1.87
TRS85YDR108W IES6P32617 166 aa3.39□□□□□ -1.87
TRS85YDR108W GGC1P38988 300 aa3.39□□□□□ -1.87
TRS85YDR108W YEL067CP39978 195 aa3.39□□□□□ -1.87
TRS85YDR108W YPL261CQ08976 102 aa3.39□□□□□ -1.87
TRS85YDR108W YPR108W-AQ3E7B3 70 aa3.39□□□□□ -1.87
TRS85YDR108W RPL28P02406 149 aaKnown RBP3.39□□□□□ -1.87
TRS85YDR108W RPL42AP0CX27 106 aaKnown RBP3.39□□□□□ -1.87
TRS85YDR108W RPL42BP0CX28 106 aaKnown RBP3.39□□□□□ -1.87
TRS85YDR108W PAU7P39545 55 aa3.39□□□□□ -1.87
TRS85YDR108W YDR381C-AQ3E6R5 114 aa3.39□□□□□ -1.87
TRS85YDR108W YNR077CP53758 84 aa3.38□□□□□ -1.87
TRS85YDR108W YDR102CQ03864 110 aa3.38□□□□□ -1.87
TRS85YDR108W SHH4Q06236 168 aa3.38□□□□□ -1.87
TRS85YDR108W YLR012CQ07927 99 aa3.38□□□□□ -1.87
TRS85YDR108W EMC6Q12431 108 aa3.38□□□□□ -1.87
TRS85YDR108W RPL18AP0CX49 186 aaKnown RBP3.37□□□□□ -1.87
TRS85YDR108W RPL18BP0CX50 186 aaKnown RBP3.37□□□□□ -1.87
TRS85YDR108W UBC4P15731 148 aa3.37□□□□□ -1.87
TRS85YDR108W YHR173CP38864 112 aa3.37□□□□□ -1.87
TRS85YDR108W HUA1P40325 198 aa3.37□□□□□ -1.87
TRS85YDR108W YIA6P40556 373 aa3.37□□□□□ -1.87
TRS85YDR108W YFL051CP43552 160 aa3.37□□□□□ -1.87
TRS85YDR108W YFR054CP43622 192 aa3.37□□□□□ -1.87
TRS85YDR108W SWS2P53937 143 aa3.37□□□□□ -1.87
TRS85YDR108W HAL1Q01766 294 aa3.37□□□□□ -1.87
TRS85YDR108W RRS1Q08746 203 aaKnown RBP3.37□□□□□ -1.87
TRS85YDR108W DSS4P32601 143 aa3.37□□□□□ -1.87
TRS85YDR108W YHR180WP38868 163 aa3.37□□□□□ -1.87
TRS85YDR108W PET8P38921 284 aa3.37□□□□□ -1.87
TRS85YDR108W YER187WP40102 141 aa3.37□□□□□ -1.87
TRS85YDR108W YNL217WP40152 326 aa3.37□□□□□ -1.87
TRS85YDR108W YGR045CP53229 120 aa3.37□□□□□ -1.87
TRS85YDR108W NIP7Q08962 181 aaKnown RBP3.37□□□□□ -1.87
TRS85YDR108W SIM1P40472 476 aa3.36□□□□□ -1.87
TRS85YDR108W VEL1P53058 206 aa3.36□□□□□ -1.87
TRS85YDR108W MIX14Q04341 121 aa3.36□□□□□ -1.87
TRS85YDR108W API2Q04413 109 aa3.36□□□□□ -1.87
TRS85YDR108W YMR321CQ04898 105 aa3.36□□□□□ -1.87
TRS85YDR108W RRT15Q3E811 62 aa3.36□□□□□ -1.87
TRS85YDR108W RPL16BP26785 198 aaKnown RBP3.35□□□□□ -1.87
TRS85YDR108W RPL32P38061 130 aaKnown RBP3.35□□□□□ -1.87
TRS85YDR108W SWD3P38123 315 aa3.35□□□□□ -1.87
TRS85YDR108W YSY6P38374 65 aa3.35□□□□□ -1.87
TRS85YDR108W IRC23Q08416 157 aa3.35□□□□□ -1.87
TRS85YDR108W YDL022C-AP0C5L6 82 aa3.35□□□□□ -1.87
TRS85YDR108W RPS8AP0CX39 200 aaKnown RBP3.35□□□□□ -1.87
TRS85YDR108W RPS8BP0CX40 200 aaKnown RBP3.35□□□□□ -1.87
TRS85YDR108W YNL208WP40159 199 aaKnown RBP3.35□□□□□ -1.87
TRS85YDR108W VHS2P40463 436 aa3.35□□□□□ -1.87
TRS85YDR108W YFL019CP43576 117 aa3.35□□□□□ -1.87
TRS85YDR108W EAF6P47128 113 aa3.35□□□□□ -1.87
TRS85YDR108W TOM7P53507 60 aa3.35□□□□□ -1.87
TRS85YDR108W IGO2Q9P305 131 aa3.35□□□□□ -1.87
TRS85YDR108W OST1P41543 476 aaKnown RBP3.34□□□□□ -1.87
TRS85YDR108W NRM1P53718 249 aa3.34□□□□□ -1.87
TRS85YDR108W RSM19P53733 91 aaPredicted RBP3.34□□□□□ -1.87
TRS85YDR108W PIR1Q03178 341 aa3.34□□□□□ -1.87
TRS85YDR108W MIC10Q96VH5 97 aa3.34□□□□□ -1.87
TRS85YDR108W PFY1P07274 126 aa3.34□□□□□ -1.88
TRS85YDR108W RPL20AP0CX23 172 aaKnown RBP3.34□□□□□ -1.88
TRS85YDR108W RPL20BP0CX24 172 aaPredicted RBP3.34□□□□□ -1.88
TRS85YDR108W RPL30P14120 105 aaKnown RBP3.34□□□□□ -1.88
TRS85YDR108W HSP12P22943 109 aaKnown RBP3.34□□□□□ -1.88
TRS85YDR108W YKR032WP36127 104 aa3.34□□□□□ -1.88
TRS85YDR108W YBL081WP38180 368 aaKnown RBP3.34□□□□□ -1.88
TRS85YDR108W VTC1P40046 129 aaRIP-Chip data3.34□□□□□ -1.88not detected
TRS85YDR108W GAT4P40569 121 aa3.34□□□□□ -1.88
TRS85YDR108W NCA3P46955 337 aa3.34□□□□□ -1.88
TRS85YDR108W PBA1Q05778 276 aa3.34□□□□□ -1.88
TRS85YDR108W YOL118CQ08259 102 aa3.34□□□□□ -1.88
TRS85YDR108W YLR112WQ12130 139 aa3.34□□□□□ -1.88
TRS85YDR108W TIM22Q12328 207 aa3.34□□□□□ -1.88
TRS85YDR108W YBR209WP38311 105 aa3.33□□□□□ -1.88
TRS85YDR108W AIM19P40502 157 aa3.33□□□□□ -1.88
TRS85YDR108W YNL046WP53956 172 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms