RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W HSK3P69852 69 aa3.25□□□□□ -1.89
VMA1YDL185W COX12Q01519 83 aa3.25□□□□□ -1.89
VMA1YDL185W HNT3Q08702 217 aa3.25□□□□□ -1.89
VMA1YDL185W YOR376WQ08900 122 aa3.25□□□□□ -1.89
VMA1YDL185W YPR053CQ6Q5F3 151 aa3.25□□□□□ -1.89
VMA1YDL185W UBC5P15732 148 aa3.24□□□□□ -1.89
VMA1YDL185W MED6P38782 295 aa3.24□□□□□ -1.89
VMA1YDL185W YIL029CP40538 142 aa3.24□□□□□ -1.89
VMA1YDL185W FIP1P45976 327 aa3.24□□□□□ -1.89
VMA1YDL185W DAD4P69851 72 aa3.24□□□□□ -1.89
VMA1YDL185W YKL070WP36087 169 aa3.24□□□□□ -1.89
VMA1YDL185W TIF34P40217 347 aaKnown RBP3.24□□□□□ -1.89
VMA1YDL185W YGR018CP53211 109 aa3.24□□□□□ -1.89
VMA1YDL185W FCF1Q05498 189 aaPredicted RBP3.24□□□□□ -1.89
VMA1YDL185W YPL261CQ08976 102 aa3.24□□□□□ -1.89
VMA1YDL185W Q0255P03881 472 aa3.23□□□□□ -1.89
VMA1YDL185W PCL2P25693 308 aa3.23□□□□□ -1.89
VMA1YDL185W TIR2P33890 251 aa3.23□□□□□ -1.89
VMA1YDL185W YIL059CP40520 121 aa3.23□□□□□ -1.89
VMA1YDL185W MRPL49P40858 161 aaPredicted RBP3.23□□□□□ -1.89
VMA1YDL185W YCL021W-AQ96VH3 125 aa3.23□□□□□ -1.89
VMA1YDL185W YHR140WP38842 239 aa3.23□□□□□ -1.89
VMA1YDL185W YIP1P53039 248 aa3.23□□□□□ -1.89
VMA1YDL185W CAX4P53223 239 aa3.23□□□□□ -1.89
VMA1YDL185W YGR045CP53229 120 aa3.23□□□□□ -1.89
VMA1YDL185W LEE1Q02799 301 aaKnown RBP3.23□□□□□ -1.89
VMA1YDL185W TIM22Q12328 207 aa3.23□□□□□ -1.89
VMA1YDL185W RPL11AP0C0W9 174 aaKnown RBP3.23□□□□□ -1.89
VMA1YDL185W RPL27AP0C2H6 136 aaKnown RBP3.23□□□□□ -1.89
VMA1YDL185W RPL15BP54780 204 aaPredicted RBP3.23□□□□□ -1.89
VMA1YDL185W RPL11BQ3E757 174 aaPredicted RBP3.23□□□□□ -1.89
VMA1YDL185W COA3Q3E7B2 85 aa3.23□□□□□ -1.89
VMA1YDL185W AGA1P32323 725 aa3.22□□□□□ -1.89
VMA1YDL185W DSE2P38844 325 aa3.22□□□□□ -1.89
VMA1YDL185W SKI6P46948 246 aaPredicted RBP3.22□□□□□ -1.89
VMA1YDL185W KNH1P50112 268 aa3.22□□□□□ -1.89
VMA1YDL185W FAS1P07149 2051 aaKnown RBP3.22□□□□□ -1.89
VMA1YDL185W RPL32P38061 130 aaKnown RBP3.22□□□□□ -1.89
VMA1YDL185W LCB3P47013 409 aa3.22□□□□□ -1.89
VMA1YDL185W IGO2Q9P305 131 aa3.22□□□□□ -1.89
VMA1YDL185W YHR139C-AO13536 103 aa3.21□□□□□ -1.89
VMA1YDL185W PFY1P07274 126 aa3.21□□□□□ -1.89
VMA1YDL185W RPS28BP0C0X0 67 aaKnown RBP3.21□□□□□ -1.89
VMA1YDL185W RPS8AP0CX39 200 aaKnown RBP3.21□□□□□ -1.89
VMA1YDL185W RPS8BP0CX40 200 aaKnown RBP3.21□□□□□ -1.89
VMA1YDL185W YCR006CP25350 157 aa3.21□□□□□ -1.89
VMA1YDL185W YNL217WP40152 326 aa3.21□□□□□ -1.89
VMA1YDL185W PGU1P47180 361 aa3.21□□□□□ -1.89
VMA1YDL185W UBC11P52492 156 aa3.21□□□□□ -1.89
VMA1YDL185W MST27P53176 234 aa3.21□□□□□ -1.89
VMA1YDL185W RPS28AQ3E7X9 67 aaPredicted RBP3.21□□□□□ -1.89
VMA1YDL185W HMRA2P0CY13 119 aa3.21□□□□□ -1.9
VMA1YDL185W YKR073CP36153 106 aa3.21□□□□□ -1.9
VMA1YDL185W SNP1Q00916 300 aaPredicted RBP3.21□□□□□ -1.9
VMA1YDL185W ABF2Q02486 183 aa3.21□□□□□ -1.9
VMA1YDL185W GPI19Q04082 140 aa3.21□□□□□ -1.9
VMA1YDL185W DAD1Q12248 94 aa3.21□□□□□ -1.9
VMA1YDL185W YIL086CP40503 102 aa3.21□□□□□ -1.9
VMA1YDL185W YIA6P40556 373 aa3.21□□□□□ -1.9
VMA1YDL185W RXT3Q07458 294 aa3.21□□□□□ -1.9
VMA1YDL185W YIL046W-AQ3E7Z4 54 aa3.21□□□□□ -1.9
VMA1YDL185W ECM12O13529 151 aa3.2□□□□□ -1.9
VMA1YDL185W RAD6P06104 172 aa3.2□□□□□ -1.9
VMA1YDL185W BET2P20133 325 aa3.2□□□□□ -1.9
VMA1YDL185W SMP1P38128 452 aa3.2□□□□□ -1.9
VMA1YDL185W YBL071CP38185 102 aa3.2□□□□□ -1.9
VMA1YDL185W SGN1P40561 250 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
VMA1YDL185W YFL015CP43578 164 aa3.2□□□□□ -1.9
VMA1YDL185W ATP23P53722 227 aa3.2□□□□□ -1.9
VMA1YDL185W YDR114CQ04597 100 aa3.2□□□□□ -1.9
VMA1YDL185W YDR029WQ12111 104 aa3.2□□□□□ -1.9
VMA1YDL185W MRPL23Q12487 163 aaPredicted RBP3.2□□□□□ -1.9
VMA1YDL185W DIF1O13577 133 aa3.2□□□□□ -1.9
VMA1YDL185W YHL042WP38729 150 aa3.2□□□□□ -1.9
VMA1YDL185W YER085CP40058 173 aa3.2□□□□□ -1.9
VMA1YDL185W YFL051CP43552 160 aa3.2□□□□□ -1.9
VMA1YDL185W YDR381C-AQ3E6R5 114 aa3.2□□□□□ -1.9
VMA1YDL185W POL2P21951 2222 aaKnown RBP3.2□□□□□ -1.9
VMA1YDL185W VHS2P40463 436 aa3.19□□□□□ -1.9
VMA1YDL185W GON7P46984 123 aa3.19□□□□□ -1.9
VMA1YDL185W TOS6P48560 102 aa3.19□□□□□ -1.9
VMA1YDL185W YBR121C-AP0C5L4 52 aa3.19□□□□□ -1.9
VMA1YDL185W GLE2P40066 365 aa3.19□□□□□ -1.9
VMA1YDL185W REE1P40893 198 aa3.19□□□□□ -1.9
VMA1YDL185W COF1Q03048 143 aaKnown RBP3.19□□□□□ -1.9
VMA1YDL185W YHR213WP0CI67 198 aa3.19□□□□□ -1.9
VMA1YDL185W MBB1P39534 108 aa3.19□□□□□ -1.9
VMA1YDL185W ERG28P40030 148 aa3.19□□□□□ -1.9
VMA1YDL185W SPI1P40092 148 aa3.19□□□□□ -1.9
VMA1YDL185W IMP2P46972 177 aa3.19□□□□□ -1.9
VMA1YDL185W SWS2P53937 143 aa3.19□□□□□ -1.9
VMA1YDL185W AIM11P87275 137 aa3.19□□□□□ -1.9
VMA1YDL185W PRM7Q12459 698 aa3.19□□□□□ -1.9
VMA1YDL185W YPL038W-AQ3E7B4 63 aa3.19□□□□□ -1.9
VMA1YDL185W SDC1Q03323 175 aa3.18□□□□□ -1.9
VMA1YDL185W IRC23Q08416 157 aa3.18□□□□□ -1.9
VMA1YDL185W TOM6P33448 61 aa3.18□□□□□ -1.9
VMA1YDL185W AIM34Q03673 198 aa3.18□□□□□ -1.9
VMA1YDL185W RPL2AP0CX45 254 aaKnown RBP3.17□□□□□ -1.9
VMA1YDL185W RPL2BP0CX46 254 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms