RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH5	YDL154W	CPA1	P07258	411 aa	Known RBP	0.98	□□□□□ -2.25
MSH5	YDL154W	RPB7	P34087	171 aa		0.98	□□□□□ -2.25
MSH5	YDL154W	TRS20	P38334	175 aa		0.98	□□□□□ -2.25
MSH5	YDL154W	YER121W	P40076	114 aa		0.98	□□□□□ -2.25
MSH5	YDL154W	SMX2	P40204	77 aa	Known RBP	0.98	□□□□□ -2.25
MSH5	YDL154W	DIE2	P50076	525 aa		0.98	□□□□□ -2.25
MSH5	YDL154W	COF1	Q03048	143 aa	Known RBP	0.98	□□□□□ -2.25
MSH5	YDL154W	FCF2	Q12035	217 aa	Predicted RBP	0.98	□□□□□ -2.25
MSH5	YDL154W	MCP1	Q12106	302 aa		0.98	□□□□□ -2.25
MSH5	YDL154W	MBF1	O14467	151 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	VAR1	P02381	398 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	POR1	P04840	283 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	PAU19	P0CE85	124 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	PAU21	P0CE86	164 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	PAU22	P0CE87	164 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	UBI4	P0CG63	381 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	RPL35A	P0CX84	120 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	RPL35B	P0CX85	120 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	FPR1	P20081	114 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	MDH2	P22133	377 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	PAU3	P25610	124 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	TOM6	P33448	61 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	YBR013C	P38215	129 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	UMP1	P38293	148 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	YNL217W	P40152	326 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	EMC4	P53073	190 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	YLR296W	Q05898	108 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	RAD28	Q12021	506 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	FLO9	P39712	1322 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	SPO13	P23624	291 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	YGL010W	P25338	174 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	YCR090C	P25654	182 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	YCR099C	P25657	155 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	SNU13	P39990	126 aa	Known RBP	0.97	□□□□□ -2.25
MSH5	YDL154W	SPC25	P40014	221 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	PEP8	P40335	379 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	AIM19	P40502	157 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	SNN1	P48232	102 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	PET191	Q02772	108 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	HUT1	Q12520	339 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	WIP1	Q2V2P8	89 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	VMA9	Q3E7B6	73 aa		0.97	□□□□□ -2.25
MSH5	YDL154W	FMP49	A0A023PZB3	126 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	PAI3	P01094	68 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YFR010W-A	P0C5N0	62 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YER039C-A	P0CD97	72 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	RPB3	P16370	318 aa	Known RBP	0.96	□□□□□ -2.26
MSH5	YDL154W	FZF1	P32805	299 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YKR070W	P36151	352 aa	Known RBP	0.96	□□□□□ -2.26
MSH5	YDL154W	DSE2	P38844	325 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YEA4	P40004	342 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YFR054C	P43622	192 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YDR274C	P87283	123 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	EST3	Q03096	181 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YOR385W	Q08909	290 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	MRS1	P07266	363 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	SHB17	P36136	271 aa	Known RBP	0.96	□□□□□ -2.26
MSH5	YDL154W	YBR032W	P38223	100 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	GAA1	P39012	614 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	XPT1	P47165	209 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	MIC27	P50945	234 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YNR064C	P53750	290 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	LSM3	P57743	89 aa	Known RBP	0.96	□□□□□ -2.26
MSH5	YDL154W	RRT7	Q07829	113 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	PRM3	Q08931	133 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	YOS1	Q3E834	85 aa		0.96	□□□□□ -2.26
MSH5	YDL154W	RAS2	P01120	322 aa	Known RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	RPL2A	P0CX45	254 aa	Known RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	RPL2B	P0CX46	254 aa	Known RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	GCV3	P39726	170 aa	Predicted RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	VPS28	Q02767	242 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YML079W	Q03629	201 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	NAT3	Q06504	195 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YOR015W	Q12169	119 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YCR075W-A	Q3E830	75 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	INO4	P13902	151 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	ATG8	P38182	117 aa	RIP-Chip data	0.95	□□□□□ -2.26	not detected
MSH5	YDL154W	YEL028W	P39989	153 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	PHS1	P40857	217 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	SKI6	P46948	246 aa	Predicted RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	BUD25	P85052	153 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YHP1	Q04116	353 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	AVO2	Q04749	426 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	COA4	Q05809	96 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	RAF1	Q06891	181 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	FUN14	P18411	198 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YCR085W	P25650	117 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	EMP24	P32803	203 aa	Known RBP	0.95	□□□□□ -2.26
MSH5	YDL154W	PAU16	P35994	123 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YBR209W	P38311	105 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YER135C	P40082	130 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YPL073C	P40323	161 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YNR077C	P53758	84 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	ATP19	P81451	68 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YMR320W	Q04897	101 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YOL014W	Q08110	124 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	DGA1	Q08650	418 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	YDL180W	Q12301	547 aa		0.95	□□□□□ -2.26
MSH5	YDL154W	ECM12	O13529	151 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	UBC4	P15731	148 aa		0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms