RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C REE1P40893 198 aa3.66□□□□□ -1.82
CDC48YDL126C RSM19P53733 91 aaPredicted RBP3.66□□□□□ -1.82
CDC48YDL126C SPG4Q04438 115 aa3.66□□□□□ -1.82
CDC48YDL126C MID2P36027 376 aa3.66□□□□□ -1.82
CDC48YDL126C SVP26P38869 228 aa3.66□□□□□ -1.82
CDC48YDL126C CCS1P40202 249 aaKnown RBP3.66□□□□□ -1.82
CDC48YDL126C FIP1P45976 327 aa3.66□□□□□ -1.82
CDC48YDL126C ARP3P47117 449 aaKnown RBP3.66□□□□□ -1.82
CDC48YDL126C MIX14Q04341 121 aa3.66□□□□□ -1.82
CDC48YDL126C YOL160WQ08321 113 aa3.66□□□□□ -1.82
CDC48YDL126C YOR186WQ08560 144 aa3.66□□□□□ -1.82
CDC48YDL126C FIT3Q08907 204 aa3.66□□□□□ -1.82
CDC48YDL126C YOS1Q3E834 85 aa3.66□□□□□ -1.82
CDC48YDL126C ENV10Q99382 181 aa3.66□□□□□ -1.82
CDC48YDL126C ARC40P38328 384 aaKnown RBP3.65□□□□□ -1.83
CDC48YDL126C IGO2Q9P305 131 aa3.65□□□□□ -1.83
CDC48YDL126C FMP49A0A023PZB3 126 aa3.65□□□□□ -1.83
CDC48YDL126C SFT1P43682 97 aa3.65□□□□□ -1.83
CDC48YDL126C FSH2Q05015 223 aa3.65□□□□□ -1.83
CDC48YDL126C YOR097CQ12274 175 aaPredicted RBP3.65□□□□□ -1.83
CDC48YDL126C YHR214C-EQ8TGK0 99 aa3.65□□□□□ -1.83
CDC48YDL126C YGL010WP25338 174 aa3.64□□□□□ -1.83
CDC48YDL126C OM14P38325 134 aa3.64□□□□□ -1.83
CDC48YDL126C YAR068WP39564 161 aa3.64□□□□□ -1.83
CDC48YDL126C ECO1P43605 281 aa3.64□□□□□ -1.83
CDC48YDL126C BXI1P48558 297 aa3.64□□□□□ -1.83
CDC48YDL126C YDR102CQ03864 110 aa3.64□□□□□ -1.83
CDC48YDL126C CRC1Q12289 327 aa3.64□□□□□ -1.83
CDC48YDL126C LDB16P25587 256 aa3.64□□□□□ -1.83
CDC48YDL126C YIL169CP40442 995 aa3.64□□□□□ -1.83
CDC48YDL126C YJL028WP47062 111 aa3.64□□□□□ -1.83
CDC48YDL126C BUD25P85052 153 aa3.64□□□□□ -1.83
CDC48YDL126C VPS71Q03433 280 aa3.64□□□□□ -1.83
CDC48YDL126C YMR254CQ04838 102 aa3.64□□□□□ -1.83
CDC48YDL126C RRT7Q07829 113 aa3.64□□□□□ -1.83
CDC48YDL126C RRS1Q08746 203 aaKnown RBP3.64□□□□□ -1.83
CDC48YDL126C JID1Q12350 301 aa3.64□□□□□ -1.83
CDC48YDL126C MPD1Q12404 318 aaKnown RBP3.64□□□□□ -1.83
CDC48YDL126C YCR024C-BQ3E7Z8 88 aa3.64□□□□□ -1.83
CDC48YDL126C HTL1Q9URQ5 78 aa3.64□□□□□ -1.83
CDC48YDL126C YGR050CP53231 118 aa3.63□□□□□ -1.83
CDC48YDL126C ATO3Q12359 275 aa3.63□□□□□ -1.83
CDC48YDL126C YND1P40009 630 aa3.63□□□□□ -1.83
CDC48YDL126C YER134CP40081 178 aa3.63□□□□□ -1.83
CDC48YDL126C YMR317WQ04893 1140 aa3.63□□□□□ -1.83
CDC48YDL126C RAF1Q06891 181 aa3.63□□□□□ -1.83
CDC48YDL126C YOR105WQ08504 108 aa3.63□□□□□ -1.83
CDC48YDL126C QCR9P22289 66 aa3.62□□□□□ -1.83
CDC48YDL126C YRA2P36036 203 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CDC48YDL126C OST1P41543 476 aaKnown RBP3.62□□□□□ -1.83
CDC48YDL126C DSK2P48510 373 aa3.62□□□□□ -1.83
CDC48YDL126C IRC25Q07951 179 aa3.62□□□□□ -1.83
CDC48YDL126C YOL029CQ08187 201 aa3.62□□□□□ -1.83
CDC48YDL126C YPS3Q12303 508 aa3.62□□□□□ -1.83
CDC48YDL126C TOM40P23644 387 aaKnown RBP3.62□□□□□ -1.83
CDC48YDL126C RPL14AP36105 138 aaKnown RBP3.62□□□□□ -1.83
CDC48YDL126C FLO5P38894 1075 aa3.62□□□□□ -1.83
CDC48YDL126C POP3P53833 195 aaPredicted RBP3.62□□□□□ -1.83
CDC48YDL126C HPA2Q06592 156 aa3.62□□□□□ -1.83
CDC48YDL126C YDR119W-AQ2V2P9 66 aa3.62□□□□□ -1.83
CDC48YDL126C YPL073CP40323 161 aa3.61□□□□□ -1.83
CDC48YDL126C TIM18Q08749 192 aa3.61□□□□□ -1.83
CDC48YDL126C RPL23AP0CX41 137 aaKnown RBP3.61□□□□□ -1.83
CDC48YDL126C RPL23BP0CX42 137 aaKnown RBP3.61□□□□□ -1.83
CDC48YDL126C AHT1P29589 182 aa3.61□□□□□ -1.83
CDC48YDL126C YHL042WP38729 150 aa3.61□□□□□ -1.83
CDC48YDL126C YHL018WP38744 120 aaPredicted RBP3.61□□□□□ -1.83
CDC48YDL126C YOR015WQ12169 119 aa3.6□□□□□ -1.83
CDC48YDL126C YPL038W-AQ3E7B4 63 aa3.6□□□□□ -1.83
CDC48YDL126C BRR2P32639 2163 aaKnown RBP3.6□□□□□ -1.83
CDC48YDL126C APS1P35181 156 aa3.6□□□□□ -1.83
CDC48YDL126C YHR140WP38842 239 aa3.6□□□□□ -1.83
CDC48YDL126C SNF11P38956 169 aa3.6□□□□□ -1.83
CDC48YDL126C YNL200CP40165 246 aaKnown RBP3.6□□□□□ -1.83
CDC48YDL126C RPL21AQ02753 160 aaKnown RBP3.6□□□□□ -1.83
CDC48YDL126C YMR103CQ04436 120 aa3.6□□□□□ -1.83
CDC48YDL126C YOR292CQ08743 309 aa3.6□□□□□ -1.83
CDC48YDL126C YDR029WQ12111 104 aa3.6□□□□□ -1.83
CDC48YDL126C RPL21BQ12672 160 aaKnown RBP3.6□□□□□ -1.83
CDC48YDL126C YAL063C-AQ3E791 96 aa3.6□□□□□ -1.83
CDC48YDL126C TRP1P00912 224 aa3.59□□□□□ -1.83
CDC48YDL126C MRPL39P36533 70 aa3.59□□□□□ -1.83
CDC48YDL126C SMP1P38128 452 aa3.59□□□□□ -1.83
CDC48YDL126C YER181CP40097 107 aa3.59□□□□□ -1.83
CDC48YDL126C SDS23P53172 527 aa3.59□□□□□ -1.83
CDC48YDL126C MIX17Q03667 156 aa3.59□□□□□ -1.83
CDC48YDL126C AGA1P32323 725 aa3.59□□□□□ -1.84
CDC48YDL126C YAR029WP39549 74 aa3.59□□□□□ -1.84
CDC48YDL126C AIM19P40502 157 aa3.59□□□□□ -1.84
CDC48YDL126C YIA6P40556 373 aa3.59□□□□□ -1.84
CDC48YDL126C CRH1P53301 507 aa3.59□□□□□ -1.84
CDC48YDL126C SMT3Q12306 101 aaKnown RBP3.59□□□□□ -1.84
CDC48YDL126C FMP27Q06179 2628 aa3.58□□□□□ -1.84
CDC48YDL126C Q0255P03881 472 aa3.58□□□□□ -1.84
CDC48YDL126C RPL30P14120 105 aaKnown RBP3.58□□□□□ -1.84
CDC48YDL126C SPO13P23624 291 aa3.58□□□□□ -1.84
CDC48YDL126C YOR376W-AQ3E805 51 aa3.58□□□□□ -1.84
CDC48YDL126C HFA1P32874 2273 aa3.58□□□□□ -1.84
CDC48YDL126C RPR2P40571 144 aa3.58□□□□□ -1.84
CDC48YDL126C BRP1P53194 125 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms