RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDH3	YDL078C	YOR105W	Q08504	108 aa		4.62	□□□□□ -1.67
MDH3	YDL078C	YOR292C	Q08743	309 aa		4.62	□□□□□ -1.67
MDH3	YDL078C	YCR024C-B	Q3E7Z8	88 aa		4.62	□□□□□ -1.67
MDH3	YDL078C	YGR035W-A	Q45U48	73 aa		4.62	□□□□□ -1.67
MDH3	YDL078C	CDC43	P18898	376 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YCR041W	P37265	110 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	CYB5	P40312	120 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YFR057W	P43625	151 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YGL118C	P53132	145 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	CAX4	P53223	239 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	BET5	Q03630	159 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YMR082C	Q04276	118 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	NAT3	Q06504	195 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YFH1	Q07540	174 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YDR029W	Q12111	104 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	FCY1	Q12178	158 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	YLR412C-A	Q3E742	68 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	ENV10	Q99382	181 aa		4.61	□□□□□ -1.67
MDH3	YDL078C	RPA12	P32529	125 aa	Known RBP	4.6	□□□□□ -1.67
MDH3	YDL078C	CWP2	P43497	92 aa		4.6	□□□□□ -1.67
MDH3	YDL078C	ARP3	P47117	449 aa	Known RBP	4.6	□□□□□ -1.67
MDH3	YDL078C	YNL234W	P53857	426 aa		4.6	□□□□□ -1.67
MDH3	YDL078C	SPG4	Q04438	115 aa		4.6	□□□□□ -1.67
MDH3	YDL078C	YKL183C-A	Q3E765	70 aa		4.6	□□□□□ -1.67
MDH3	YDL078C	YBL112C	Q3E7Y4	105 aa		4.6	□□□□□ -1.67
MDH3	YDL078C	YDR157W	A0A023PZE8	133 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	RPS22A	P0C0W1	130 aa	Known RBP	4.59	□□□□□ -1.67
MDH3	YDL078C	PBI2	P0CT04	75 aa	Known RBP	4.59	□□□□□ -1.67
MDH3	YDL078C	YMR31	P19955	123 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	ROX3	P25046	220 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	PRS4	P38063	326 aa	Predicted RBP	4.59	□□□□□ -1.67
MDH3	YDL078C	SAS2	P40963	338 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	GPI2	P46961	280 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	YDL242W	Q07746	117 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	YOL029C	Q08187	201 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	POC4	Q12245	148 aa	Predicted RBP	4.59	□□□□□ -1.67
MDH3	YDL078C	UTP23	Q12339	254 aa	Known RBP	4.59	□□□□□ -1.67
MDH3	YDL078C	HUG1	Q6Q5K6	68 aa		4.59	□□□□□ -1.67
MDH3	YDL078C	YCR085W	P25650	117 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	GLE2	P40066	365 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	HPA2	Q06592	156 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	GEP3	Q08622	556 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	SMT3	Q12306	101 aa	Known RBP	4.58	□□□□□ -1.68
MDH3	YDL078C	BOL1	Q3E793	110 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	YFL041W-A	Q3E817	63 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	SCS22	Q6Q595	175 aa		4.58	□□□□□ -1.68
MDH3	YDL078C	KTI12	P34253	313 aa	Known RBP	4.57	□□□□□ -1.68
MDH3	YDL078C	YAR068W	P39564	161 aa		4.57	□□□□□ -1.68
MDH3	YDL078C	COF1	Q03048	143 aa	Known RBP	4.57	□□□□□ -1.68
MDH3	YDL078C	VPS71	Q03433	280 aa		4.57	□□□□□ -1.68
MDH3	YDL078C	SPO13	P23624	291 aa		4.56	□□□□□ -1.68
MDH3	YDL078C	AHT1	P29589	182 aa		4.56	□□□□□ -1.68
MDH3	YDL078C	LCB3	P47013	409 aa		4.56	□□□□□ -1.68
MDH3	YDL078C	FCF1	Q05498	189 aa	Predicted RBP	4.56	□□□□□ -1.68
MDH3	YDL078C	ARC18	Q05933	178 aa	Known RBP	4.56	□□□□□ -1.68
MDH3	YDL078C	DFM1	Q12743	341 aa	Known RBP	4.56	□□□□□ -1.68
MDH3	YDL078C	MRS4	P23500	304 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	MID2	P36027	376 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	YKL044W	P36092	106 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	YPT10	P38146	199 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	MST28	P39552	234 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	VPS55	P47111	140 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	NRG1	Q03125	231 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	YAL063C-A	Q3E791	96 aa		4.55	□□□□□ -1.68
MDH3	YDL078C	SOD1	P00445	154 aa	Known RBP	4.54	□□□□□ -1.68
MDH3	YDL078C	QCR9	P22289	66 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	UBC11	P52492	156 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	MMS2	P53152	137 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	HOR7	Q05827	59 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	YLR042C	Q07990	161 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	YDR119W-A	Q2V2P9	66 aa		4.54	□□□□□ -1.68
MDH3	YDL078C	TOM6	P33448	61 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	YKR045C	P36138	183 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	URM1	P40554	99 aa	Predicted RBP	4.53	□□□□□ -1.68
MDH3	YDL078C	FIP1	P45976	327 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	DSK2	P48510	373 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	KNH1	P50112	268 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	YGR164W	P53291	111 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	COX12	Q01519	83 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	MRX11	Q03079	207 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	YMR103C	Q04436	120 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	YMR320W	Q04897	101 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	RXT3	Q07458	294 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	YPL229W	Q99395	206 aa		4.53	□□□□□ -1.68
MDH3	YDL078C	TRP1	P00912	224 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	NRG2	P38082	220 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	SNF11	P38956	169 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	YER181C	P40097	107 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	WWM1	P43582	211 aa	Known RBP	4.52	□□□□□ -1.69
MDH3	YDL078C	POP3	P53833	195 aa	Predicted RBP	4.52	□□□□□ -1.69
MDH3	YDL078C	YNL277W-A	Q3E7Z0	62 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	COA2	Q3E823	68 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	HTL1	Q9URQ5	78 aa		4.52	□□□□□ -1.69
MDH3	YDL078C	YBL059W	P34224	193 aa		4.51	□□□□□ -1.69
MDH3	YDL078C	PAM17	P36147	197 aa		4.51	□□□□□ -1.69
MDH3	YDL078C	YHL042W	P38729	150 aa		4.51	□□□□□ -1.69
MDH3	YDL078C	TDA4	P47153	279 aa		4.51	□□□□□ -1.69
MDH3	YDL078C	MSO1	P53604	210 aa	Known RBP	4.51	□□□□□ -1.69
MDH3	YDL078C	AYT1	Q12226	474 aa		4.51	□□□□□ -1.69
MDH3	YDL078C	DAD1	Q12248	94 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms