RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	QCR9	P22289	66 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	YCR050C	P25630	102 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	YGL118C	P53132	145 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	LPP1	Q04396	274 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	RRT15	Q3E811	62 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	YCR085W	P25650	117 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	SFT2	P38166	215 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	CAX4	P53223	239 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	CRH1	P53301	507 aa		4.13	□□□□□ -1.75
TUP1	YCR084C	RPL15A	P05748	204 aa	Known RBP	4.12	□□□□□ -1.75
TUP1	YCR084C	SKI6	P46948	246 aa	Predicted RBP	4.12	□□□□□ -1.75
TUP1	YCR084C	RPL15B	P54780	204 aa	Predicted RBP	4.12	□□□□□ -1.75
TUP1	YCR084C	AIR2	Q12476	344 aa	Known RBP	4.12	□□□□□ -1.75
TUP1	YCR084C	HTL1	Q9URQ5	78 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	HSP12	P22943	109 aa	Known RBP	4.12	□□□□□ -1.75
TUP1	YCR084C	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	TDA4	P47153	279 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	SDS23	P53172	527 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	YGR164W	P53291	111 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	DAD1	Q12248	94 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	ATG40	Q99325	256 aa		4.12	□□□□□ -1.75
TUP1	YCR084C	YIL163C	P40448	117 aa		4.11	□□□□□ -1.75
TUP1	YCR084C	YMR007W	Q03675	126 aa		4.11	□□□□□ -1.75
TUP1	YCR084C	YOR292C	Q08743	309 aa		4.11	□□□□□ -1.75
TUP1	YCR084C	MIC10	Q96VH5	97 aa		4.11	□□□□□ -1.75
TUP1	YCR084C	PCP1	P53259	346 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	YPL264C	Q08980	353 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	MID2	P36027	376 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	YGR269W	P40326	108 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	YGR018C	P53211	109 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	ENV10	Q99382	181 aa		4.1	□□□□□ -1.75
TUP1	YCR084C	UBC4	P15731	148 aa		4.09	□□□□□ -1.75
TUP1	YCR084C	DDR48	P18899	430 aa	Known RBP	4.09	□□□□□ -1.75
TUP1	YCR084C	NHP2	P32495	156 aa	Predicted RBP	4.09	□□□□□ -1.75
TUP1	YCR084C	YBL059W	P34224	193 aa		4.09	□□□□□ -1.75
TUP1	YCR084C	YAR068W	P39564	161 aa		4.09	□□□□□ -1.75
TUP1	YCR084C	POP3	P53833	195 aa	Predicted RBP	4.09	□□□□□ -1.75
TUP1	YCR084C	YOL029C	Q08187	201 aa		4.09	□□□□□ -1.75
TUP1	YCR084C	YLR112W	Q12130	139 aa		4.09	□□□□□ -1.75
TUP1	YCR084C	YAL064W	P39711	94 aa		4.09	□□□□□ -1.76
TUP1	YCR084C	URM1	P40554	99 aa	Predicted RBP	4.09	□□□□□ -1.76
TUP1	YCR084C	YLR296W	Q05898	108 aa		4.09	□□□□□ -1.76
TUP1	YCR084C	USV1	Q12132	391 aa		4.09	□□□□□ -1.76
TUP1	YCR084C	YFR032C-B	Q8TGU2	87 aa		4.09	□□□□□ -1.76
TUP1	YCR084C	RPL16A	P26784	199 aa	Known RBP	4.08	□□□□□ -1.76
TUP1	YCR084C	YFL015C	P43578	164 aa		4.08	□□□□□ -1.76
TUP1	YCR084C	SWT21	P53873	357 aa	Predicted RBP	4.08	□□□□□ -1.76
TUP1	YCR084C	HUG1	Q6Q5K6	68 aa		4.08	□□□□□ -1.76
TUP1	YCR084C	MRPL39	P36533	70 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	GPI18	P38211	433 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	TPC1	P53257	314 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	YKL023C-A	Q2V2P3	75 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	YLR365W	Q7LIF2	110 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	RPS8A	P0CX39	200 aa	Known RBP	4.07	□□□□□ -1.76
TUP1	YCR084C	RPS8B	P0CX40	200 aa	Known RBP	4.07	□□□□□ -1.76
TUP1	YCR084C	YHL018W	P38744	120 aa	Predicted RBP	4.07	□□□□□ -1.76
TUP1	YCR084C	YGL193C	P53097	103 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	SUN4	P53616	420 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	YDR102C	Q03864	110 aa		4.07	□□□□□ -1.76
TUP1	YCR084C	PIR5	P46999	287 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	MIM1	Q08176	113 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	DFM1	Q12743	341 aa	Known RBP	4.06	□□□□□ -1.76
TUP1	YCR084C	RPA12	P32529	125 aa	Known RBP	4.06	□□□□□ -1.76
TUP1	YCR084C	SNF11	P38956	169 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	TVP23	P38962	199 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	YFL019C	P43576	117 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	BRP1	P53194	125 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	HPA2	Q06592	156 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	AYT1	Q12226	474 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	YLR111W	Q12528	110 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	YDR119W-A	Q2V2P9	66 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	YPR108W-A	Q3E7B3	70 aa		4.06	□□□□□ -1.76
TUP1	YCR084C	RPB7	P34087	171 aa		4.05	□□□□□ -1.76
TUP1	YCR084C	RSM19	P53733	91 aa	Predicted RBP	4.05	□□□□□ -1.76
TUP1	YCR084C	IRC25	Q07951	179 aa		4.05	□□□□□ -1.76
TUP1	YCR084C	YER145C-A	A0A023PYF4	145 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	RPL23A	P0CX41	137 aa	Known RBP	4.04	□□□□□ -1.76
TUP1	YCR084C	RPL23B	P0CX42	137 aa	Known RBP	4.04	□□□□□ -1.76
TUP1	YCR084C	YKL044W	P36092	106 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	YNL208W	P40159	199 aa	Known RBP	4.04	□□□□□ -1.76
TUP1	YCR084C	YFR035C	P43608	114 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	NIP7	Q08962	181 aa	Known RBP	4.04	□□□□□ -1.76
TUP1	YCR084C	FLO9	P39712	1322 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	SWD3	P38123	315 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	YHR180W	P38868	163 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	YER135C	P40082	130 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	YNL217W	P40152	326 aa		4.04	□□□□□ -1.76
TUP1	YCR084C	TDA8	Q6B2U8	126 aa		4.03	□□□□□ -1.76
TUP1	YCR084C	EDC2	P40023	145 aa	Predicted RBP	4.03	□□□□□ -1.76
TUP1	YCR084C	TDA2	P40045	126 aa		4.03	□□□□□ -1.76
TUP1	YCR084C	YDR042C	Q03205	200 aa		4.03	□□□□□ -1.76
TUP1	YCR084C	YOR343C	Q12484	108 aa		4.03	□□□□□ -1.76
TUP1	YCR084C	YCL021W-A	Q96VH3	125 aa		4.03	□□□□□ -1.76
TUP1	YCR084C	KRE1	P17260	313 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	YCR041W	P37265	110 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	NRG2	P38082	220 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	YHL042W	P38729	150 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	SVP26	P38869	228 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	MIX17	Q03667	156 aa		4.02	□□□□□ -1.77
TUP1	YCR084C	BET1	P22804	142 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms