RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W PAU13P38725 120 aa3.91□□□□□ -1.78
SHP1YBL058W TEM1P38987 245 aa3.91□□□□□ -1.78
SHP1YBL058W CYB5P40312 120 aa3.91□□□□□ -1.78
SHP1YBL058W YGR017WP53210 297 aa3.91□□□□□ -1.78
SHP1YBL058W PMP3P87284 55 aa3.91□□□□□ -1.78
SHP1YBL058W PAU10Q03050 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU20Q08322 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU9Q3E770 120 aa3.91□□□□□ -1.78
SHP1YBL058W PCC1Q3E833 88 aa3.91□□□□□ -1.78
SHP1YBL058W RPS22AP0C0W1 130 aaKnown RBP3.9□□□□□ -1.79
SHP1YBL058W YGR026WP53217 278 aa3.9□□□□□ -1.79
SHP1YBL058W YMR320WQ04897 101 aa3.9□□□□□ -1.79
SHP1YBL058W DXO1Q06349 442 aa3.9□□□□□ -1.79
SHP1YBL058W YOR105WQ08504 108 aa3.9□□□□□ -1.79
SHP1YBL058W YAR023CD6VPM8 179 aa3.89□□□□□ -1.79
SHP1YBL058W SEC59P20048 519 aa3.89□□□□□ -1.79
SHP1YBL058W POF1P25576 258 aa3.89□□□□□ -1.79
SHP1YBL058W MIX23P38162 196 aa3.89□□□□□ -1.79
SHP1YBL058W SHG1P38337 142 aa3.89□□□□□ -1.79
SHP1YBL058W LCL1Q02786 101 aa3.89□□□□□ -1.79
SHP1YBL058W TIR1P10863 254 aa3.88□□□□□ -1.79
SHP1YBL058W ERG28P40030 148 aa3.88□□□□□ -1.79
SHP1YBL058W YIL059CP40520 121 aa3.88□□□□□ -1.79
SHP1YBL058W MOG1P47123 218 aa3.88□□□□□ -1.79
SHP1YBL058W GLO1P50107 326 aa3.88□□□□□ -1.79
SHP1YBL058W MRP49P32388 137 aa3.87□□□□□ -1.79
SHP1YBL058W HIT1P46973 164 aa3.87□□□□□ -1.79
SHP1YBL058W MRPL31P14063 131 aaPredicted RBP3.86□□□□□ -1.79
SHP1YBL058W MSK1P32048 576 aa3.86□□□□□ -1.79
SHP1YBL058W RIB5P38145 238 aa3.86□□□□□ -1.79
SHP1YBL058W ARC15P40518 154 aaRIP-Chip data3.86□□□□□ -1.79not detected
SHP1YBL058W YLR307C-AQ3E825 87 aa3.86□□□□□ -1.79
SHP1YBL058W RPL16AP26784 199 aaKnown RBP3.85□□□□□ -1.79
SHP1YBL058W YHR140WP38842 239 aa3.85□□□□□ -1.79
SHP1YBL058W RPB11P38902 120 aa3.85□□□□□ -1.79
SHP1YBL058W SNU23Q12368 194 aaPredicted RBP3.85□□□□□ -1.79
SHP1YBL058W YCL001W-BQ96VH2 84 aa3.85□□□□□ -1.79
SHP1YBL058W SRP21P32342 167 aa3.84□□□□□ -1.79
SHP1YBL058W SRP14P38985 146 aa3.84□□□□□ -1.79
SHP1YBL058W NAT3Q06504 195 aa3.84□□□□□ -1.79
SHP1YBL058W CSM4Q08955 156 aa3.84□□□□□ -1.79
SHP1YBL058W YDR029WQ12111 104 aa3.84□□□□□ -1.79
SHP1YBL058W RPL42AP0CX27 106 aaKnown RBP3.83□□□□□ -1.8
SHP1YBL058W RPL42BP0CX28 106 aaKnown RBP3.83□□□□□ -1.8
SHP1YBL058W GPI19Q04082 140 aa3.83□□□□□ -1.8
SHP1YBL058W TVP18Q04767 167 aa3.83□□□□□ -1.8
SHP1YBL058W RPL27AP0C2H6 136 aaKnown RBP3.82□□□□□ -1.8
SHP1YBL058W YBL081WP38180 368 aaKnown RBP3.82□□□□□ -1.8
SHP1YBL058W UIP3P39547 235 aa3.82□□□□□ -1.8
SHP1YBL058W MMS2P53152 137 aa3.82□□□□□ -1.8
SHP1YBL058W THG1P53215 237 aaKnown RBP3.82□□□□□ -1.8
SHP1YBL058W PLP1Q04004 230 aa3.82□□□□□ -1.8
SHP1YBL058W SMT3Q12306 101 aaKnown RBP3.82□□□□□ -1.8
SHP1YBL058W DDR48P18899 430 aaKnown RBP3.81□□□□□ -1.8
SHP1YBL058W QRI5P32344 111 aa3.81□□□□□ -1.8
SHP1YBL058W ZRT1P32804 376 aa3.81□□□□□ -1.8
SHP1YBL058W SMP1P38128 452 aa3.81□□□□□ -1.8
SHP1YBL058W YAL064WP39711 94 aa3.81□□□□□ -1.8
SHP1YBL058W YGL088WP53151 121 aa3.81□□□□□ -1.8
SHP1YBL058W DAD3P69850 94 aa3.81□□□□□ -1.8
SHP1YBL058W GIM5Q04493 163 aa3.81□□□□□ -1.8
SHP1YBL058W YLR194CQ05777 254 aa3.81□□□□□ -1.8
SHP1YBL058W ARC18Q05933 178 aaKnown RBP3.81□□□□□ -1.8
SHP1YBL058W YBR298C-AQ8TGK4 73 aa3.81□□□□□ -1.8
SHP1YBL058W YBR209WP38311 105 aa3.8□□□□□ -1.8
SHP1YBL058W RPC10P40422 70 aa3.8□□□□□ -1.8
SHP1YBL058W DCV1P43595 202 aa3.8□□□□□ -1.8
SHP1YBL058W SNN1P48232 102 aa3.8□□□□□ -1.8
SHP1YBL058W SNA2P56508 79 aa3.8□□□□□ -1.8
SHP1YBL058W YNL162W-AQ3E7A8 72 aa3.8□□□□□ -1.8
SHP1YBL058W GTO3Q04806 366 aa3.79□□□□□ -1.8
SHP1YBL058W MHR1Q06630 226 aa3.79□□□□□ -1.8
SHP1YBL058W DCN1Q12395 269 aa3.79□□□□□ -1.8
SHP1YBL058W FMP49A0A023PZB3 126 aa3.78□□□□□ -1.8
SHP1YBL058W MRPS9P38120 278 aa3.78□□□□□ -1.8
SHP1YBL058W YIL024CP40543 189 aa3.78□□□□□ -1.8
SHP1YBL058W YKR032WP36127 104 aa3.77□□□□□ -1.81
SHP1YBL058W PAU7P39545 55 aa3.77□□□□□ -1.81
SHP1YBL058W SEC72P39742 193 aaKnown RBP3.77□□□□□ -1.81
SHP1YBL058W YER085CP40058 173 aa3.77□□□□□ -1.81
SHP1YBL058W PHS1P40857 217 aa3.77□□□□□ -1.81
SHP1YBL058W CIN5P40917 295 aa3.77□□□□□ -1.81
SHP1YBL058W PAU5P43575 122 aa3.77□□□□□ -1.81
SHP1YBL058W YGR149WP48236 432 aa3.77□□□□□ -1.81
SHP1YBL058W ENV10Q99382 181 aa3.77□□□□□ -1.81
SHP1YBL058W HMRA1P0CY11 126 aa3.76□□□□□ -1.81
SHP1YBL058W PAM17P36147 197 aa3.76□□□□□ -1.81
SHP1YBL058W RPL32P38061 130 aaKnown RBP3.76□□□□□ -1.81
SHP1YBL058W YER076CP40049 302 aa3.76□□□□□ -1.81
SHP1YBL058W OST3P48439 350 aa3.76□□□□□ -1.81
SHP1YBL058W BNS1P50084 137 aa3.76□□□□□ -1.81
SHP1YBL058W YDR010CQ12426 110 aa3.76□□□□□ -1.81
SHP1YBL058W PEX22P39718 180 aa3.75□□□□□ -1.81
SHP1YBL058W VMA9Q3E7B6 73 aa3.75□□□□□ -1.81
SHP1YBL058W YBL112CQ3E7Y4 105 aa3.75□□□□□ -1.81
SHP1YBL058W YGL010WP25338 174 aa3.74□□□□□ -1.81
SHP1YBL058W AIM29P36154 155 aa3.74□□□□□ -1.81
SHP1YBL058W YBR219CP38317 127 aa3.74□□□□□ -1.81
SHP1YBL058W VMA7P39111 118 aa3.74□□□□□ -1.81
SHP1YBL058W AIM19P40502 157 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms