RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W FRQ1Q06389 190 aa0.19□□□□□ -2.38
UTP20YBL004W YEL008WP40001 126 aa0.19□□□□□ -2.38
UTP20YBL004W SAC1P32368 623 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W ERG24P32462 438 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W PAU2P32612 120 aa0.19□□□□□ -2.38
UTP20YBL004W AME1P38313 324 aa0.19□□□□□ -2.38
UTP20YBL004W BRR6P53062 197 aa0.19□□□□□ -2.38
UTP20YBL004W LSM7P53905 115 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W EOS1P53938 366 aa0.19□□□□□ -2.38
UTP20YBL004W YML018CQ03730 393 aa0.19□□□□□ -2.38
UTP20YBL004W HNT1Q04344 158 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W YPL225WQ08971 146 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W FYV7Q12247 151 aa0.19□□□□□ -2.38
UTP20YBL004W SHB17P36136 271 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W ARC15P40518 154 aaRIP-Chip data0.19□□□□□ -2.38not detected
UTP20YBL004W MSS2P40990 351 aa0.19□□□□□ -2.38
UTP20YBL004W ATG5Q12380 294 aa0.19□□□□□ -2.38
UTP20YBL004W RNP1P32385 249 aa0.19□□□□□ -2.38
UTP20YBL004W UMP1P38293 148 aa0.19□□□□□ -2.38
UTP20YBL004W RPS20P38701 121 aaKnown RBP0.19□□□□□ -2.38
UTP20YBL004W ILM1P47155 203 aa0.19□□□□□ -2.38
UTP20YBL004W MRPS17Q03246 237 aaPredicted RBP0.19□□□□□ -2.38
UTP20YBL004W CSN9Q03981 162 aa0.19□□□□□ -2.38
UTP20YBL004W YLR412C-AQ3E742 68 aa0.19□□□□□ -2.38
UTP20YBL004W HMRA2P0CY13 119 aa0.18□□□□□ -2.38
UTP20YBL004W SRB7P47822 140 aa0.18□□□□□ -2.38
UTP20YBL004W GTO3Q04806 366 aa0.18□□□□□ -2.38
UTP20YBL004W GPI11Q06636 219 aa0.18□□□□□ -2.38
UTP20YBL004W YBR200W-AQ3E755 54 aa0.18□□□□□ -2.38
UTP20YBL004W RPS28BP0C0X0 67 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W AIM29P36154 155 aa0.18□□□□□ -2.38
UTP20YBL004W YEL067CP39978 195 aa0.18□□□□□ -2.38
UTP20YBL004W ARL3Q02804 198 aa0.18□□□□□ -2.38
UTP20YBL004W MAK3Q03503 176 aa0.18□□□□□ -2.38
UTP20YBL004W RPS28AQ3E7X9 67 aaPredicted RBP0.18□□□□□ -2.38
UTP20YBL004W COA2Q3E823 68 aa0.18□□□□□ -2.38
UTP20YBL004W COA6Q3E846 104 aa0.18□□□□□ -2.38
UTP20YBL004W TRP1P00912 224 aa0.18□□□□□ -2.38
UTP20YBL004W YIL163CP40448 117 aa0.18□□□□□ -2.38
UTP20YBL004W YML108WQ03759 105 aa0.18□□□□□ -2.38
UTP20YBL004W POM33Q12164 279 aa0.18□□□□□ -2.38
UTP20YBL004W ERV2Q12284 196 aa0.18□□□□□ -2.38
UTP20YBL004W FMP16Q12497 93 aa0.18□□□□□ -2.38
UTP20YBL004W RPS22BQ3E7Y3 130 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W YLR236CA0A023PZG4 107 aa0.18□□□□□ -2.38
UTP20YBL004W YAL065CO13511 128 aa0.18□□□□□ -2.38
UTP20YBL004W MBF1O14467 151 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W MRS1P07266 363 aa0.18□□□□□ -2.38
UTP20YBL004W SEC11P15367 167 aa0.18□□□□□ -2.38
UTP20YBL004W PET18P25362 215 aa0.18□□□□□ -2.38
UTP20YBL004W YGL262WP53054 175 aa0.18□□□□□ -2.38
UTP20YBL004W KEI1Q06346 221 aa0.18□□□□□ -2.38
UTP20YBL004W SNU23Q12368 194 aaPredicted RBP0.18□□□□□ -2.38
UTP20YBL004W YBR255C-AQ3E776 120 aa0.18□□□□□ -2.38
UTP20YBL004W ADH3P07246 375 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W YBL039W-BP0C268 59 aa0.18□□□□□ -2.38
UTP20YBL004W MRPL17P36528 281 aa0.18□□□□□ -2.38
UTP20YBL004W YEA4P40004 342 aa0.18□□□□□ -2.38
UTP20YBL004W YPL073CP40323 161 aa0.18□□□□□ -2.38
UTP20YBL004W SFT1P43682 97 aa0.18□□□□□ -2.38
UTP20YBL004W ATP19P81451 68 aa0.18□□□□□ -2.38
UTP20YBL004W TMA20P89886 181 aaPredicted RBP0.18□□□□□ -2.38
UTP20YBL004W ACL4Q03771 387 aa0.18□□□□□ -2.38
UTP20YBL004W CUE4Q04201 117 aaPredicted RBP0.18□□□□□ -2.38
UTP20YBL004W YDL157CQ12082 118 aa0.18□□□□□ -2.38
UTP20YBL004W YOR011W-AQ3E807 68 aa0.18□□□□□ -2.38
UTP20YBL004W THP2O13539 261 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W HIS3P06633 220 aa0.18□□□□□ -2.38
UTP20YBL004W GCN3P14741 305 aa0.18□□□□□ -2.38
UTP20YBL004W VAM7P32912 316 aa0.18□□□□□ -2.38
UTP20YBL004W PET100P38958 111 aa0.18□□□□□ -2.38
UTP20YBL004W CWC25P53854 179 aaKnown RBP0.18□□□□□ -2.38
UTP20YBL004W PFY1P07274 126 aa0.17□□□□□ -2.38
UTP20YBL004W RPL18AP0CX49 186 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W RPL18BP0CX50 186 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W UBC8P28263 218 aa0.17□□□□□ -2.38
UTP20YBL004W HOT13P36078 116 aa0.17□□□□□ -2.38
UTP20YBL004W YEA6P39953 335 aa0.17□□□□□ -2.38
UTP20YBL004W BNS1P50084 137 aa0.17□□□□□ -2.38
UTP20YBL004W YCL001W-AP87012 153 aa0.17□□□□□ -2.38
UTP20YBL004W ANT1Q06497 328 aa0.17□□□□□ -2.38
UTP20YBL004W YOL097W-AQ3E7Y9 61 aa0.17□□□□□ -2.38
UTP20YBL004W YOL166W-AQ8TGJ1 51 aa0.17□□□□□ -2.38
UTP20YBL004W NTF2P33331 125 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W MID2P36027 376 aa0.17□□□□□ -2.38
UTP20YBL004W DFG10P40526 253 aa0.17□□□□□ -2.38
UTP20YBL004W MRM2P53123 320 aa0.17□□□□□ -2.38
UTP20YBL004W RRN9P53437 365 aa0.17□□□□□ -2.38
UTP20YBL004W BOR1P53838 576 aa0.17□□□□□ -2.38
UTP20YBL004W POR1P04840 283 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W IDP1P21954 428 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W TIP1P27654 210 aaPredicted RBP0.17□□□□□ -2.38
UTP20YBL004W YBL059WP34224 193 aa0.17□□□□□ -2.38
UTP20YBL004W PAU16P35994 123 aa0.17□□□□□ -2.38
UTP20YBL004W MSA2P36157 363 aa0.17□□□□□ -2.38
UTP20YBL004W POP7P38291 140 aa0.17□□□□□ -2.38
UTP20YBL004W TIR3P40552 269 aa0.17□□□□□ -2.38
UTP20YBL004W SMD3P43321 101 aaKnown RBP0.17□□□□□ -2.38
UTP20YBL004W YLR162WQ06235 118 aa0.17□□□□□ -2.38
UTP20YBL004W DFR1P07807 211 aaKnown RBP RIP-Chip data0.17□□□□□ -2.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms