RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SMIM28A0A1B0GU29 152 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 BCLAF3A2AJT9 711 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 GOLGA8IPA6NC78 632 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 TRIM49BA6NDI0 452 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 GOLGA8JA6NMD2 632 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 PPP1R3GB7ZBB8 358 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF197O14709 1029 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF263O14978 683 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 SYN3O14994 580 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CLIC2O15247 247 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 OGTO15294 1046 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 RPP40O75818 363 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 B3GAT3O94766 335 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 LRG1P02750 347 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 ADRB2P07550 413 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 WEE1P30291 646 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 ACOT2P49753 483 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 NOVA1P51513 510 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CYP2J2P51589 502 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 LRRC32Q14392 662 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM196Q5HYL7 178 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 TPGS2Q68CL5 300 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 NAIF1Q69YI7 327 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 KLHL10Q6JEL2 608 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 ARMCX5Q6P1M9 558 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CRELD2Q6UXH1 353 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CACNA2D4Q7Z3S7 1137 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 HACE1Q8IYU2 909 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 SYNPOQ8N3V7 929 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 POMGNT1Q8WZA1 660 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 BBC3Q96PG8 261 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 FAM213AQ9BRX8 229 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 EDEM2Q9BV94 578 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 PCIF1Q9H4Z3 704 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 FBRSL1Q9HCM7 1045 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 VPS45Q9NRW7 570 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 AFF4Q9UHB7 1163 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CPSF3Q9UKF6 684 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 AGO2Q9UKV8 859 aaKnown RBP7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CTNND2Q9UQB3 1225 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 YIPF1Q9Y548 306 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 HECTD1Q9ULT8 2610 aa7.98□□□□□ -1.13
PHGDH-225ENST00000641720 A0A1W2PRU2 124 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 ANTXRLA6NF34 631 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 C4orf47A7E2U8 309 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 PDXKO00764 312 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 DCLK1O15075 740 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 NR3C1P04150 777 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CLTAP09496 248 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 KCNE1P15382 129 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CSRP1P21291 193 aaKnown RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 GARTP22102 1010 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 AARSP49588 968 aaKnown RBP eCLIP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CASP4P49662 377 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 SPAG1Q07617 926 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 TWF1Q12792 350 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 FOXC1Q12948 553 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 SLC10A6Q3KNW5 377 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 SLFN12LQ6IEE8 588 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 C1orf228Q6PIY5 440 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CEP68Q76N32 757 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 HS2ST1Q7LGA3 356 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 APBB1IPQ7Z5R6 666 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM150AQ86TG1 271 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CBWD2Q8IUF1 395 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 ARID3BQ8IVW6 561 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 C12orf56Q8IXR9 622 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 TTC9BQ8N6N2 239 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 TRIML1Q8N9V2 468 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 PLEKHO2Q8TD55 490 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 NOC3LQ8WTT2 800 aaKnown RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 NELFBQ8WX92 580 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 ZCCHC14Q8WYQ9 949 aaKnown RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 EEF2KMTQ96G04 330 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 UROC1Q96N76 676 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 ACAP3Q96P50 834 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 MED15Q96RN5 788 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 FAM83CQ9BQN1 747 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 GZF1Q9H116 711 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CYP4F11Q9HBI6 524 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 OBP2AQ9NY56 170 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 CNTN3Q9P232 1028 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 TRAF3IP3Q9Y228 551 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 NUMA1Q14980 2115 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 PTPRJQ12913 1337 aa7.97□□□□□ -1.13
PHGDH-225ENST00000641720 SPTA1P02549 2419 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 TTC26A0AVF1 554 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 CYSRT1A8MQ03 144 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 LACTBL1A8MY62 500 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms