RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 CRTAC1Q9NQ79 661 aa19.23■□□□□ 0.67
PHGDH-209ENST00000641074 TBX21Q9UL17 535 aa19.23■□□□□ 0.67
PHGDH-209ENST00000641074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-209ENST00000641074 F8VP50 259 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 PARNO95453 639 aaKnown RBP19.22■□□□□ 0.67
PHGDH-209ENST00000641074 CYP11A1P05108 521 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 RNASELQ05823 741 aaKnown RBP19.22■□□□□ 0.67
PHGDH-209ENST00000641074 PIGHQ14442 188 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-209ENST00000641074 MDH1BQ5I0G3 518 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 FAM102AQ5T9C2 384 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-209ENST00000641074 OR6B2Q6IFH4 312 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 FBXO38Q6PIJ6 1188 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 PAQR9Q6ZVX9 377 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 DEFB128Q7Z7B8 93 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 EMC1Q8N766 993 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 NIPA2Q8N8Q9 360 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 RTP3Q9BQQ7 232 aa19.22■□□□□ 0.67
PHGDH-209ENST00000641074 CLDN5O00501 218 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 KRIT1O00522 736 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 H2AFXP16104 143 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 CDR1P51861 262 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 LONRF2Q1L5Z9 754 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 RHOT1Q8IXI2 618 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 ABI1Q8IZP0 508 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 CRIPAKQ8N1N5 446 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 FNIP1Q8TF40 1166 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 PAWRQ96IZ0 340 aaKnown RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 PIWIL1Q96J94 861 aaKnown RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 SUSD3Q96L08 255 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 LRRC1Q9BTT6 524 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 DNAJB4Q9UDY4 337 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 MYBPHLA2RUH7 354 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 PSTPIP1O43586 416 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 TCF4P15884 667 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 PSMA2P25787 234 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 SSR1P43307 286 aaKnown RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 OR1G1P47890 313 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 GATMP50440 423 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 RBM10P98175 930 aaKnown RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 CC2D1AQ6P1N0 951 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 METTL23Q86XA0 190 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 SCUBE3Q8IX30 993 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 SPATA18Q8TC71 538 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 FAM193BQ96PV7 902 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-209ENST00000641074 DUSP16Q9BY84 665 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 B3GNT5Q9BYG0 378 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 C11orf49Q9H6J7 331 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 TMEM39AQ9NV64 488 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 DSEQ9UL01 958 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 LRFN2Q9ULH4 789 aa19.21■□□□□ 0.67
PHGDH-209ENST00000641074 TSC2P49815 1807 aa19.21■□□□□ 0.66
PHGDH-209ENST00000641074 PAPSS1O43252 624 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-209ENST00000641074 PCSK1P29120 753 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 RPL34P49207 117 aaKnown RBP19.2■□□□□ 0.66
PHGDH-209ENST00000641074 SNX16P57768 344 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 MRPS25P82663 173 aaKnown RBP19.2■□□□□ 0.66
PHGDH-209ENST00000641074 PLCB3Q01970 1234 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 SEL1L2Q5TEA6 688 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 OLFML1Q6UWY5 402 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 KRT12Q99456 494 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 NAP1L3Q99457 506 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-209ENST00000641074 NR2E1Q9Y466 385 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 TTC3P53804 2025 aa19.2■□□□□ 0.66
PHGDH-209ENST00000641074 TMEM189-UBE2V1I3L0A0 370 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 XPO1O14980 1071 aaKnown RBP19.19■□□□□ 0.66
PHGDH-209ENST00000641074 PLA2G4AP47712 749 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 CLUL1Q15846 466 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 LRRC26Q2I0M4 334 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 ADAT2Q7Z6V5 191 aaKnown RBP19.19■□□□□ 0.66
PHGDH-209ENST00000641074 KLHL7Q8IXQ5 586 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 MYCBPAPQ8TBZ2 947 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 HDAC7Q8WUI4 952 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 PCED1BQ96HM7 432 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 ACBD6Q9BR61 282 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 MED10Q9BTT4 135 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 RAB21Q9UL25 225 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 TARSL2A2RTX5 802 aaKnown RBP19.19■□□□□ 0.66
PHGDH-209ENST00000641074 BEST1O76090 585 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 CLTBP09497 229 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 NPR3P17342 541 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 SLC6A3Q01959 620 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 TAF5Q15542 800 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 OVOS1Q6IE37 1185 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 CCDC70Q6NSX1 233 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 TRNP1Q6NT89 227 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 PIGZQ86VD9 579 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 ARFGAP1Q8N6T3 406 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 KHSRPQ92945 711 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-209ENST00000641074 HSFY1Q96LI6 401 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 NRDE2Q9H7Z3 1164 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 CYLDQ9NQC7 956 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 PCDHB8Q9UN66 801 aa19.19■□□□□ 0.66
PHGDH-209ENST00000641074 PRG3Q9Y2Y8 225 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-209ENST00000641074 ARHGEF37A1IGU5 675 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 CCDC188H7C350 402 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 GRAP2O75791 330 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms