RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
PAX6-280ENST00000640872 FEM1BQ9UK73 627 aa14.35□□□□□ -0.11
PAX6-280ENST00000640872 CCPG1Q9ULG6 757 aa14.35□□□□□ -0.11
PAX6-280ENST00000640872 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 MAGEC1O60732 1142 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 ICAM1P05362 532 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 TSHRP16473 764 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 BGNP21810 368 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 PLCB3Q01970 1234 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 GHRHRQ02643 423 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 SLC18A2Q05940 514 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 ZYXQ15942 572 aaKnown RBP14.34□□□□□ -0.11
PAX6-280ENST00000640872 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
PAX6-280ENST00000640872 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 FGD4Q96M96 766 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 DDX56Q9NY93 547 aaKnown RBP14.34□□□□□ -0.11
PAX6-280ENST00000640872 STRIP2Q9ULQ0 834 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 COL4A5P29400 1685 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 MYH9P35579 1960 aaKnown RBP14.34□□□□□ -0.11
PAX6-280ENST00000640872 TCRBV7S3A2A0A539 114 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 C3orf70A6NLC5 250 aaPredicted RBP14.34□□□□□ -0.11
PAX6-280ENST00000640872 F8W8V4 182 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 TMEM63AO94886 807 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 MT-ND3P03897 115 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 MYL2P10916 166 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 TNNI1P19237 187 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 PGM1P36871 562 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 ARHGAP24Q8N264 748 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 FAM111AQ96PZ2 611 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 FNBP1Q96RU3 617 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 NMUR2Q9GZQ4 415 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 PDP2Q9P2J9 529 aa14.34□□□□□ -0.11
PAX6-280ENST00000640872 ARID2Q68CP9 1835 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 SFNP31947 248 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 RPL22P35268 128 aaKnown RBP14.33□□□□□ -0.11
PAX6-280ENST00000640872 PTGER2P43116 358 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 PSMC4P43686 418 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 RPS6KA3P51812 740 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 RNF217Q8TC41 542 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 TTC17Q96AE7 1141 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 BICD1Q96G01 975 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 NR1H4Q96RI1 486 aaPredicted RBP14.33□□□□□ -0.11
PAX6-280ENST00000640872 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 TRIM4Q9C037 500 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 FAM192AQ9GZU8 254 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 C10orf88Q9H8K7 445 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 STK32BQ9NY57 414 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 ARMCX1Q9P291 453 aa14.33□□□□□ -0.11
PAX6-280ENST00000640872 CAPN14A8MX76 684 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 E5RJQ4 531 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 KLF11O14901 512 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 ZNF132P52740 706 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 NLRP11P59045 1033 aaKnown RBP14.33□□□□□ -0.12
PAX6-280ENST00000640872 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
PAX6-280ENST00000640872 CC2D2BQ6DHV5 1058 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 ALYREFQ86V81 257 aaKnown RBP14.33□□□□□ -0.12
PAX6-280ENST00000640872 PALM2Q8IXS6 379 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 GINM1Q9NU53 330 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 SAE1Q9UBE0 346 aaPredicted RBP14.33□□□□□ -0.12
PAX6-280ENST00000640872 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
PAX6-280ENST00000640872 IQANK1A0A1B0GTG1 560 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CALB1P05937 261 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SERPINB4P48594 390 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 KRT76Q01546 638 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 PTK7Q13308 1070 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 BBS9Q3SYG4 887 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 TMPRSS6Q8IU80 811 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CCNJLQ8IV13 435 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 NIPA2Q8N8Q9 360 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CCDC110Q8TBZ0 833 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SYTL5Q8TDW5 730 aaPredicted RBP14.32□□□□□ -0.12
PAX6-280ENST00000640872 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CYTH2Q99418 400 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 ARHGAP28Q9P2N2 729 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 PLA2G4CQ9UP65 541 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 NUB1Q9Y5A7 615 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 B2RBV5 119 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 TBXAS1P24557 533 aaPredicted RBP14.32□□□□□ -0.12
PAX6-280ENST00000640872 CAP2P40123 477 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CPA2P48052 419 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 POLE2P56282 527 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 MTM1Q13496 603 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
PAX6-280ENST00000640872 HSF5Q4G112 596 aaPredicted RBP14.32□□□□□ -0.12
PAX6-280ENST00000640872 NET1Q7Z628 596 aaPredicted RBP14.32□□□□□ -0.12
PAX6-280ENST00000640872 TREML1Q86YW5 311 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 UBR7Q8N806 425 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 FBXO27Q8NI29 283 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 SLC44A1Q8WWI5 657 aa14.32□□□□□ -0.12
PAX6-280ENST00000640872 CEP170P1Q96L14 293 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms