RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 IQCGQ9H095 443 aaKnown RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 ARMCX1Q9P291 453 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 HEY2Q9UBP5 337 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 COL2A1P02458 1487 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 SPATA31C2B4DYI2 1134 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 GM2AP17900 193 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 ELK3P41970 407 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 CEP128Q6ZU80 1094 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 PPM1NQ8N819 430 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 GPATCH2LQ9NWQ4 482 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 HMGXB4Q9UGU5 601 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 CYTH4Q9UIA0 394 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 NUMBLQ9Y6R0 609 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 INHBAP08476 426 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 CXCL8P10145 99 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 PTPRAP18433 802 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 CLDN10P78369 228 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 MOGSQ13724 837 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 IGDCC3Q8IVU1 814 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 SHOC2Q9UQ13 582 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 MCF2LO15068 1137 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 ADCY3O60266 1144 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 RNF8O76064 485 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 PRKCBP05771 671 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 BGNP21810 368 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 UBA1P22314 1058 aaKnown RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 CDH6P55285 790 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 MCL1Q07820 350 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 PTK7Q13308 1070 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 KBTBD12Q3ZCT8 623 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 FAM102AQ5T9C2 384 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 ARFGAP1Q8N6T3 406 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 MANSC1Q9H8J5 431 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 M0QYV0 167 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 TYROBPO43914 113 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 T-ENOLP0DO92 83 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 PYGBP11216 843 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 CCNB1P14635 433 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 SERPINB3P29508 390 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 GMPSP49915 693 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 RTP1P59025 263 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 C10orf82Q8WW14 230 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 MRPL4Q9BYD3 311 aaKnown RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 NRBP2Q9NSY0 501 aa15.29■□□□□ 0.04
SCARB2-221ENST00000640341 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCARB2-221ENST00000640341 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 TOM1L1O75674 476 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 ITGBL1O95965 494 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 ITGAVP06756 1048 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 RGS7P49802 495 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 C15orf59Q2T9L4 293 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 MCUR1Q96AQ8 359 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 FAF2Q96CS3 445 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 WDR83Q9BRX9 315 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 MECRQ9BV79 373 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 TSSK1BQ9BXA7 367 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 TNNC2P02585 160 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 KDELR1P24390 212 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 MIPP30301 263 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 ARL2P36404 184 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 RCN2Q14257 317 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 SLC7A6OSQ96CW6 309 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 HEXIM2Q96MH2 286 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 TRIM6Q9C030 488 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 DENND2DQ9H6A0 471 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 RAB6BQ9NRW1 208 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 DDX56Q9NY93 547 aaKnown RBP15.28■□□□□ 0.04
SCARB2-221ENST00000640341 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 MAD1L1Q9Y6D9 718 aa15.28■□□□□ 0.04
SCARB2-221ENST00000640341 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
SCARB2-221ENST00000640341 GCKP35557 465 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 ACVR2BQ13705 512 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 BMPR2Q13873 1038 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
SCARB2-221ENST00000640341 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 TRIM55Q9BYV6 548 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 FOXP3Q9BZS1 431 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 NGRNQ9NPE2 291 aaKnown RBP15.27■□□□□ 0.04
SCARB2-221ENST00000640341 RNF19AQ9NV58 838 aa15.27■□□□□ 0.04
SCARB2-221ENST00000640341 SENP1Q9P0U3 644 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms